Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst1g00421 ATGGGAACCTCTTGCCAAGAATCTCCATCACTTCTCCAAGACCTGAAGGTGACCATCGACGAAACCTCAACGATTTTTCCATCCACAGAAACTGAGAAGAAGTCCTTGTTCCTATCAAACATCGACAAGGTGGTAAACTTTGACGTGGACACGGTTCACTTCTTCGCAGCAAACAAAGATTTTCCCCCCCAAAAGGTGGCTCAGAAGTTGAAGAAGGCCCTAGAGGATGCTCTTGTGTTCTATGACTTCTTAGCCGGAAGATTGAATCTGAACCCGGAAACCGAAAGATTGGAGATAGATTGCAGCGCAAAGGGTGCTGTGTTTGTGGTGGGTTCAAGTGAGTACAAGCTAAGTGAGATTGGAGACTTAGCTTATCCCAATCCAGCTTTTGCACAGCTTTTTCACAAGAGTAAGGAACCAGGTGATCTTCCACTATGCGTTGCACAGCTCACATCTTTCAAGTGTGGTGGCTTCGCAATGGGCTTCGCAACCAGCCACACAGCGTTCGACGGACTTAGCTTCAAAACATTCTTGGACAATCTTGCAGCCTTGGCTGCTAACAAACCCTTGGCTGTGATACCCTGTCACGACAGGCATCTCCTGGCCGCACGATCCCCGCCACGTGTCACCTTCCCACACCCTGAGTTGATCGAGCTCGATAATCTAGCCACAGGCATAGAGTCTAGCGTCTTTGACGCTTCCAAAGAAGAACTCGACTTTAGGGTTTTCAAACTAACCTCAGACAACATCCTCAGCCTCAAGGAGAAAGCAAAGGGAAGCATCAATGGCAGTGCCACCGGATTTAACGTTATCACCGCCCATATATGGAGGTGCAAGGCCTTATCAGCACCGTATGACCCTGCTAGGTCATCCACCATACTATTCGCTGTGGACGTACGTTCGAAACTGAACCCTCCGTTGCCGAAAGGCTACACCGGCAACGCCGTGTTAACCGCGTTCGCGGTGGCGAAGTGCGAGGAGTTGGAGAAGAGTGAGTTCTCAAGGTTGGTGGAGATGGTGAAGGAGGGTGCAGAGAGAATGAGTGATGAGTATGCAAGGTCTATTATAGACTGCGGAGAGCTGCACAATGGGTTTCCAAACGGGGAGGTTTTGGTGTCTTCGTGGTGGAGATTAGGGTTTGAAGAGGTGGAGTATCCGTGGGGGAAGCCAAAGTATTGTTGCCCGGTGGTGCATCGTCGGAAGGATATTATTCTGTTGTTTCCTCCCTTTGGTGCAGGTGATGGGATAAATATTATAGTTGCTCTTCCTCCCAAGGAAATGGACAAATTCGGGAGCCTCTTTCACATGTTCTTGAATTGA 1320 0.4917 MGTSCQESPSLLQDLKVTIDETSTIFPSTETEKKSLFLSNIDKVVNFDVDTVHFFAANKDFPPQKVAQKLKKALEDALVFYDFLAGRLNLNPETERLEIDCSAKGAVFVVGSSEYKLSEIGDLAYPNPAFAQLFHKSKEPGDLPLCVAQLTSFKCGGFAMGFATSHTAFDGLSFKTFLDNLAALAANKPLAVIPCHDRHLLAARSPPRVTFPHPELIELDNLATGIESSVFDASKEELDFRVFKLTSDNILSLKEKAKGSINGSATGFNVITAHIWRCKALSAPYDPARSSTILFAVDVRSKLNPPLPKGYTGNAVLTAFAVAKCEELEKSEFSRLVEMVKEGAERMSDEYARSIIDCGELHNGFPNGEVLVSSWWRLGFEEVEYPWGKPKYCCPVVHRRKDIILLFPPFGAGDGINIIVALPPKEMDKFGSLFHMFLN 439
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst1g00421 439 Gene3D - 13 217 IPR023213 -
Spst1g00421 439 Pfam Transferase family 15 432 - -
Spst1g00421 439 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 25 430 - -
Spst1g00421 439 Gene3D - 224 436 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst1g00421 Spst-Chr1 5467168 5469841 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst1g00421 15 438 Monolignol Biosynthesis Gene Families AT5G48930 30.180 4.72e-54 184
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst1g00421 K13065 - gmx:100780971 721.465