Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst1g00357 ATGGGGGAGGATTCTAGGGAGTTTGGAGAAAGCACCAAAATCAACCACAAGATGGAAGAAGTTCAAAGAGAAGAAGAAATAGACCCAGAAAGCAATCCGCTGAATGAGCCACTGCTCAAGAGGAACTGGACACTGTCTTCCAACGCTCTTGCTCTGGTTGGAGAAAAAGTTTCCTTCATAGAAAGCTTGGATTATGAGATAAATGAGAATGATCTATTCAAGCATGACTGGAGAAGCAGGTCAAGAGTTCAAGTGTTGCAGTACATATTCTTGAAATGGTTATTAGCATTCCTTGTTGGACTTCTCACCGGTATTATAGCTACTCTTATCAATCTTGCTGTTGAGAATATTGCTGGGTACAAGCTTCTGGCTGTTCTCAGATACATCCACAAAGAAAGGTACTTGGCAGGTTTCCTATATTTCACGGGCATTAATTTCATTTTGACATTTGTTGCTGCTATTCTGTGCGTGTGTTTTGCTCCCACAGCAGCAGGACCTGGAATTCCTGAGATCAAAGCTTATCTTAATGGTGTTGATACTCCCAACATGTTTGGTGCTACAACATTGATTGTCAAGGTAAGATTCGCTGTATGCAATTCCTTCATTTCTGATTAA 615 0.4098 MGEDSREFGESTKINHKMEEVQREEEIDPESNPLNEPLLKRNWTLSSNALALVGEKVSFIESLDYEINENDLFKHDWRSRSRVQVLQYIFLKWLLAFLVGLLTGIIATLINLAVENIAGYKLLAVLRYIHKERYLAGFLYFTGINFILTFVAAILCVCFAPTAAGPGIPEIKAYLNGVDTPNMFGATTLIVKVRFAVCNSFISD 204
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst1g00357 204 PANTHER CHLORIDE CHANNEL PROTEIN CLC FAMILY MEMBER 21 194 - -
Spst1g00357 204 SUPERFAMILY Clc chloride channel 70 197 IPR014743 -
Spst1g00357 204 MobiDBLite consensus disorder prediction 1 33 - -
Spst1g00357 204 Pfam Voltage gated chloride channel 149 198 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
Spst1g00357 204 MobiDBLite consensus disorder prediction 1 30 - -
Spst1g00357 204 Gene3D Clc chloride channel 83 202 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst1g00357 Spst-Chr1 4773542 4774412 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst1g00357 3 193 Ion Channels AT3G27170 69.634 1.43e-85 266
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst1g00357 K05016 - gmx:100788620 368.237