Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst1g00334 ATGGCATTAGTGAGTCTCATCCAATTTGTGATTGGTAAGCGCTTCTACATTGCAGCTGGAAGAGCTCTTAGAAATGGTTCTACAAACATGGATGTCCTGGTTGCAGTGGGAAATACTGCTTCTTACATTTATTCTATTTGTGCTCTTCTATATGGCAAGTATTCGGAATGTCTTGCCAAGGGAAAGACATTTGATGCTATCAAGAAATTAGTAGAACTTGCTCCTGCAACAGCTTTACTAGTTGTCAAAGATAAAGATCCTCAATCATGGAGTTCTGCTCCTATCTACCACTCTCAATGGCTTCAAACGACAATATCAGCCATTTTTCAGCCTATAAAACCCCTTATCCTTCACAAGGAGATCCCTCTTATCCAAAATTGCGGGTTTATAATCTGGGATGTTGTCTTATTTGTGGCCCGTAGGAGTTGCTCAAAGTCAAACAAACGTTATTGGAATATTCATAAGTCTGCAACTAGTTATGCTGCAGTTTACGCTCACAAAAACCTGAATTTGAATTTATTTTTAGATCTGGATGAGAAATTGGATGCTGTAAAGACAATTTTAGATGGTGACGATTCTCCAAAAGAATTCATGCATTGCAAATGGAGAGAAGACATTATAGAGATGCTTGAAGATTTTGGCCAATCTTACCGTGTATTAGCCATAGCATATAACCAACTGAAGTTCAAAACCTCTGATGGTACCTTTCCGTCAGGATCTTTATCATCTTCTGATACATCAAAAACCATTTGTTCTATCTGCCATAAAAGAGCAATAGGTCAATTGAAGGATGAAAATCTCAAAGAGGGCTGGAACCATCATCCAAAATATTCCTCTGAGCATTCCAATATCAAATTTGATCGTGGTAACCTTGGTTTTGATCCTTCAAACAAACATGGAGATGAATGCCATGAATTGTTATCAGCAGGCCCATGCAGCATGGAACTAAAACCAGAACTTATACACACTCAAATGGAGGACAGAATGACAAAATTTTCGACCACTGAAGATGCTATAATGAAGATTGACGATTTGGAATTAAATCAGAAAACTGAAGATACATCAATGATCAGTTTCAAATTTGACAATTTGTGGTCGACATTGAAGTATCAAACAAAACTAACACAGGACAATCTGCATCAGTTGGTGGAGCTGGTCCAGAGAAATGATGAAAAGAGGGAAACCATCAGAAGGCTTCGACTAAAGGTGGAAACTTTGAAGCGCGAGAACAAGGCCCTCCAGATTTCTTTAAGCCACTCCAATGCTGGTTCAGAATGTGATCAACCACAGATATCAAAAACAGGAGGAATATCTACAAGCAAGCTGTATTCTACACAACCAACCGTCGCTTATGAATAA 1359 0.3856 MALVSLIQFVIGKRFYIAAGRALRNGSTNMDVLVAVGNTASYIYSICALLYGKYSECLAKGKTFDAIKKLVELAPATALLVVKDKDPQSWSSAPIYHSQWLQTTISAIFQPIKPLILHKEIPLIQNCGFIIWDVVLFVARRSCSKSNKRYWNIHKSATSYAAVYAHKNLNLNLFLDLDEKLDAVKTILDGDDSPKEFMHCKWREDIIEMLEDFGQSYRVLAIAYNQLKFKTSDGTFPSGSLSSSDTSKTICSICHKRAIGQLKDENLKEGWNHHPKYSSEHSNIKFDRGNLGFDPSNKHGDECHELLSAGPCSMELKPELIHTQMEDRMTKFSTTEDAIMKIDDLELNQKTEDTSMISFKFDNLWSTLKYQTKLTQDNLHQLVELVQRNDEKRETIRRLRLKVETLKRENKALQISLSHSNAGSECDQPQISKTGGISTSKLYSTQPTVAYE 452
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst1g00334 452 Pfam KIP1-like protein 168 225 IPR011684 GO:0003779
Spst1g00334 452 PANTHER P-TYPE CATION-TRANSPORTING ATPASE 2 95 - -
Spst1g00334 452 Coils Coil 382 416 - -
Spst1g00334 452 MobiDBLite consensus disorder prediction 419 452 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst1g00334 Spst-Chr1 4610083 4613759 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst1g00334 2 85 Primary Pumps ATPases AT5G44790 59.259 1.90e-28 117
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst1g00334 K17686 - pvu:PHAVU_001G086400g 402.519