Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst1g00333 ATGGATGAGATCCCCATGAAGGATATGTTTATGGGATTTGACAATTGCAGACTCTCAGCAGATGGTGGAATGCCTGAATATCTATTTATGGTGTTTTGGCAGAAGAAATGTAAAACATTTCTAGGGAATATGTCACACGTGGACCAGAGTTTCTGTAGCTTTGTGCAACAGCCTGATTTAGGGAATGGATGGATGTATGTGAATGAAAATGGGCAGATATTCGTGAAGAATGTTGGCTTTATGAAGATGAGAAGGCTCAACTCTCTCAAACGTGTCCGGGAGAAGTTAATTGAAGGATTGTCGTTCAGCATGGTTTTGGATGGAATATTGTGTAGAGCTTGGCGGGGGCATTTTGTCTGCATCACAAGTGGCACCAATATAAAACCACTGCAACGTGCAGCCAAAAGTTTGGAACCAAACGCAGCAAAGGCATTGGGAAATATAGAGAGAGGAGACCCTTTCCCTTCTCTCTCGCTTTCCTTTGACGCTTCTGACCCTTTTCTCTTCCAAGACGCCCTTTGTCTGCATCTTCTCTTCTCTGACCTAATGGCTTTCTCCGACTCTTCTTCTGGCCGCAACTCTCTCATCCCCTCCTTCCTCTACTCCTCTTCCTCCAAGACGCTTCCTCTTCACCGTATGCTCCACTCCACCGCTGCCGTCGCCGCCCCCTCAGCATCCCCAGCTAACCTCGACCCCAGATCGCGCGGCCTCATGATTCCCTCTCCCAGCGAGCCAGGCAAGATCGAGCTTTACTCGCCCGCCTTCTACGCCGCCTGCACCGCGGGTGGAATCCTCAGCTGTGGCCTCACTCACATGGCCGTCACTCCTCTTGACCTTGTCAAGTGTAATATGCAGATTGACCCTGCTAAGTACAAGAACATCTCGTCTGGTTTTGGGGTTTTGCTTAAGGAGCAGGGCTTCAGGGGCTTTTTCCGTGGCTGGGTGCCTACCTTGCTTGGTTACAGTGCCCAGGGTGCTTGCAAATTTGGATTCTATGAGTTTTTTAAGAAGTATTACTCTGATATTGCTGGCCCAGAGTATGCGAGTAAGTACAAGACTTTGATCTACCTCGCTGGTTCCGCATCTGCGGAGGTTATTGCTGATGTTGCTCTCTGCCCCTTTGAGGCTGTGAAGGTCCGTGTCCAAACACAGCCTGGTTTTGCTAGGGGTTTGGCGGATGGACTCCCAAAATTCGTGAAATCTGAAGGAACCTTGGGGCTGTACAAGGGGATAGTGCCTCTGTGGGGACGACAGATTCCTTACACAATGATGAAGTTTGCTTCATTTGAGACCATAGTTGAGTTGATCTATAAGCATGCCATTCCCACTCCAAAGAATGAGTGCACCAAAAGCCTGCAACTTGGTGTCAGTTTTGCTGGTGGATATGTTGCTGGTGTGCTTTGTGCAATTGTGTCTCATCCTGCTGATAATCTTGTCTCTTTTCTGAACAATGCTAAAGGAGCAACAGTTGGTGATGCGGTGAAGAAGCTTGGTTTGTGGGGTCTCTTCACGCGTGGTCTTCCCCTCCGTATTGTGATGATTGGAACTCTTACTGGAGCCCAATGGGGAATATATGATGCTTTCAAAGTATTTGTTGGGCTGCCAACAACTGGTGGTCCTGCACCTGCCGCTGCTCCAGCACCAGGTTCTGAGCTTGCAAAGGCATAG 1668 0.4886 MDEIPMKDMFMGFDNCRLSADGGMPEYLFMVFWQKKCKTFLGNMSHVDQSFCSFVQQPDLGNGWMYVNENGQIFVKNVGFMKMRRLNSLKRVREKLIEGLSFSMVLDGILCRAWRGHFVCITSGTNIKPLQRAAKSLEPNAAKALGNIERGDPFPSLSLSFDASDPFLFQDALCLHLLFSDLMAFSDSSSGRNSLIPSFLYSSSSKTLPLHRMLHSTAAVAAPSASPANLDPRSRGLMIPSPSEPGKIELYSPAFYAACTAGGILSCGLTHMAVTPLDLVKCNMQIDPAKYKNISSGFGVLLKEQGFRGFFRGWVPTLLGYSAQGACKFGFYEFFKKYYSDIAGPEYASKYKTLIYLAGSASAEVIADVALCPFEAVKVRVQTQPGFARGLADGLPKFVKSEGTLGLYKGIVPLWGRQIPYTMMKFASFETIVELIYKHAIPTPKNECTKSLQLGVSFAGGYVAGVLCAIVSHPADNLVSFLNNAKGATVGDAVKKLGLWGLFTRGLPLRIVMIGTLTGAQWGIYDAFKVFVGLPTTGGPAPAAAPAPGSELAKA 555
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst1g00333 555 Gene3D Mitochondrial carrier domain 254 532 IPR023395 -
Spst1g00333 555 PANTHER SOLUTE CARRIER FAMILY 25 (MITOCHONDRIAL CARRIER PHOSPHATE CARRIER), MEMBER 3, LIKE-RELATED-RELATED 234 542 IPR044677 GO:0005315|GO:1990547
Spst1g00333 555 ProSiteProfiles Solute carrier (Solcar) repeat profile. 351 435 IPR018108 -
Spst1g00333 555 ProSiteProfiles Solute carrier (Solcar) repeat profile. 452 531 IPR018108 -
Spst1g00333 555 ProSiteProfiles Solute carrier (Solcar) repeat profile. 254 338 IPR018108 -
Spst1g00333 555 Pfam Mitochondrial carrier protein 353 439 IPR018108 -
Spst1g00333 555 Pfam Mitochondrial carrier protein 257 340 IPR018108 -
Spst1g00333 555 SUPERFAMILY Mitochondrial carrier 257 527 IPR023395 -
Spst1g00333 555 FunFam Phosphate carrier protein, mitochondrial 254 532 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst1g00333 Spst-Chr1 4600867 4609931 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst1g00333 189 555 Chloroplast and Mitochondria Gene Families AT5G14040 77.660 0.0 575
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst1g00333 K15102 - gmx:548006 653.284