Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst1g00299 ATGGAGAATTCTGGCAGTAACAATGTCGGTGACATGCTGCCTCCTTCCGATCGAAAACCTGACGGTGCCGCCGCTCAAGCAGAACCGTCCTTCCCGAGGCCGCATGGTCATGCGGAGGAGGTAGAAAAGAAAGAAGAAACCGCCGCGTCTACTCCGCAAAGCCTCGAGAAAATTTCTCTACAGGTTGACCAATTAGTAACAAGTCTGAAAAACGTTAGAAATGCGAAGAACATTGAGATCCCTGACTTCATTGAGACGTACTTGGATCTGGTGGAAGAGAAGATAATGAAATACGACGCAGGTGAAGGTAAACCGAAATGGGGAGAGGTGTCGGAGGAAGATTCGTGGTTGTTGAAAAGCACGAACCGGTTTTCAAAACTGATGACATTGGTGACTGATCTACATCGTTATCATGAATCGGAGAAGATCAACGGTGCAAAAGTCTCGATGATGAACCGCATTACCTTGATCCACCAGCGTTTGATGACGTATCTGGAGGAAGACTTCCGGTTTCTGATGGAAGAATGTAGAACACCAACCGAATTGGATCCCGGAGGGAATAATTACAACAGCGTCGATACCAAAGGGAAACAACACGTGGCAGCATCGGAACAACTACATCAAGAGATGGTGCGACATCAAGAAGGTGGTGAACAAGACACGAATTTCCCGGGGTACTCGGATGAGACGATTGCCAGCCTGAGAAAGATCGCCAGCGAGATGTTATCTGGCGGCTACGAATCGGAGTGCTGCCAGGTCTACATCATCTCGCGGAGGAACGCCTTCGAGGAGGTTCACCATAAGCTAGGATTAGATAAGATCAGCATCGACGAAATGGTGATGAAGGTGCAGTGGGATACTCTATCCAGGGACATGATCCCCGCCTGGATCAACACGCTCAAGCAGTGCGCGATGATCTACTTCCCCGGCGAGCGGAAGCTCGTCCAGACCGTGTTCGCCGAGAACCGCACGGTGGCCGCCGGACTCTTCAGCAGCCTCTCCCGCGTGGTGGTGATCCAGCTTCTCAACTTTGCCGAGGGTGTCTCCATGACGAAGCGAGCCGGAGAGAAGCTCTTCAAGCTCCTCGACATGTACGAGGCCCTCTCCAACGTGATCCCCAATATGAACTTACTCTTTCCAGATGAGTGTATCGAGGAGATGAGGACTGAGATGACCCTCGCCAAGTTCAGACTTGGCGAGGCTTCCATCTACATCTTCTGCGACCTGGAGAACCATATTAAATTGGAGACAGCGAAATCCGCTGTCCCTGGTGGCGCAGTGCACCCCCTCACACGCTACATCATGAACTATCTCAACATAGTAGGGGACTACAAGGATTCCCTAGAGAAGATTTTCAACGATCATTCGAAGAAGGGGCAAGCGGATTCTACAAGCAGGCATTTAGCGGTGAAAAAGGAGGCGTGTTCGGACGCACCATCTCCGTTCTCAGCACAAGTGTTGAGGGTGATGGACTTGCTCGACTCGAGCCTGGAGGGGAAGGCGCGTCTGTACAAAGAGGTGGCGCTTAGCAACTTCTTCATGATGAACAACGGGAGGTACATGCTGCAGAAGATAAAGAGTTCTTCCGAGATGAGCAAGGTGCTGGGCGACAACTGGATCAGGAAGAAGTCCTCGGAGCTAAGAAACTACCACAAGAACTACCAGAGGGAGACGTGGAGCAGGGTGCTGCAGTGTCTGAACCACGAAGGGTTAAACGTGAATGGGAAGGTGCACAAGCCGTCGCTGAAGGAGAGGTTCAAGAGTTTCAACTCATTGTTCGACGAGATTCACAAGACGCAAAGCTCGTGGGTGGTGAAGGACGAGCAGCTTCAGTCGGAGCTTAGGGTTTCCATCTCTGCAGTTATTATCCCGGCGTACCGATCATTCGTTGCGAGGTTCGCGCAGACTTTTGACCCAGGCAGACAGACAGAGAAGTATATTAAGTACCAAGCTGAAGACATAGAGACTTACATCGAAGAGTTGTTTGATGGTAAGCCTCACCAGTCCATTGGAAAAAGGAGAACATAA 2028 0.5074 MENSGSNNVGDMLPPSDRKPDGAAAQAEPSFPRPHGHAEEVEKKEETAASTPQSLEKISLQVDQLVTSLKNVRNAKNIEIPDFIETYLDLVEEKIMKYDAGEGKPKWGEVSEEDSWLLKSTNRFSKLMTLVTDLHRYHESEKINGAKVSMMNRITLIHQRLMTYLEEDFRFLMEECRTPTELDPGGNNYNSVDTKGKQHVAASEQLHQEMVRHQEGGEQDTNFPGYSDETIASLRKIASEMLSGGYESECCQVYIISRRNAFEEVHHKLGLDKISIDEMVMKVQWDTLSRDMIPAWINTLKQCAMIYFPGERKLVQTVFAENRTVAAGLFSSLSRVVVIQLLNFAEGVSMTKRAGEKLFKLLDMYEALSNVIPNMNLLFPDECIEEMRTEMTLAKFRLGEASIYIFCDLENHIKLETAKSAVPGGAVHPLTRYIMNYLNIVGDYKDSLEKIFNDHSKKGQADSTSRHLAVKKEACSDAPSPFSAQVLRVMDLLDSSLEGKARLYKEVALSNFFMMNNGRYMLQKIKSSSEMSKVLGDNWIRKKSSELRNYHKNYQRETWSRVLQCLNHEGLNVNGKVHKPSLKERFKSFNSLFDEIHKTQSSWVVKDEQLQSELRVSISAVIIPAYRSFVARFAQTFDPGRQTEKYIKYQAEDIETYIEELFDGKPHQSIGKRRT 675
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst1g00299 675 Gene3D Exocyst complex component Exo70 109 671 - -
Spst1g00299 675 PANTHER EXOCYST COMPLEX PROTEIN EXO70 84 664 IPR004140 GO:0000145|GO:0006887
Spst1g00299 675 MobiDBLite consensus disorder prediction 1 54 - -
Spst1g00299 675 MobiDBLite consensus disorder prediction 33 50 - -
Spst1g00299 675 SUPERFAMILY Cullin repeat-like 108 663 IPR016159 -
Spst1g00299 675 Pfam Exo70 exocyst complex subunit 295 660 IPR046364 GO:0000145|GO:0005546|GO:0006887
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst1g00299 Spst-Chr1 4223147 4225174 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst1g00299 46 675 EXO70 exocyst subunit family AT5G13990 47.086 0.0 582
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst1g00299 K07195 - gmx:100820172 921.768