Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst1g00292 ATGGAAATAGCTAATGAAAATGGTTTCCAGCTTAGTGTGAAGTTAAGTGAACCAACTCTCGTTCCTCCTGCTGAAGAAACAAAGAAGGGTTTGTATTTCCTATCTAACCTTGACCAGAACATTGCAGTTATTGTGAGAACTGTTTATTGCTTCAAAACTCCTGAGAGGGGGAATGAGAAGGCAGGGGAAGTGATCAAGAATGCATTGAAGAAGGTTCTTGTCCACTATTACCCTCTTGCTGGGAGACTTACTATAAGCTCAGAGGGAAAACTCATTGTGGATTGCACAGGGGAAGGTGCCTTGTTTGTAGAAGCTGAAGCAAACTGTTCAATGGAAGAGATTGGTGACATCACAAAACCAGACCCTGGGACTCTTGGTAAGCTGGTTTATGACATTCCTGGAGCAAAGAACATTCTTCAGATGCCTCCTCTGGTTGCTCAGGTGACCAAGTTCAAATGTGGAGGCTTTGCTCTTGGGCTGTGCATGAATCACTGCATGTTTGATGGCATTGGTGCAATGGAGTTTGTGAACTCTTGGGGACAAGTGGCCAGAGACTTGCCACTCTCAATCCCTCCCGTGCTAGACAGAAGCATACTCAAGGCAAGAAACCCACCAAAGATAGAGCACCTGCATCAAGAATTTGCTGACATAGAAGACAAATCCAACACTAATAGTTTATATGAAGATGAGATGGTTTACAGATCCTTTTGTTTTGATCCTGAGAGACTAAAGCAACTGAAGATGAAAGCAATGGAAGATGGGGCTCTTGACATATGCACAACATTTGAAGTCCTCTCAGCATTTGTGTGGATTGCAAGAACCAAGGCACTGAAAATGCTGCCTGACCAACAAACAAAGCTACTTTTTGCTGTTGATGGAAGGGCCAAGTTCAACCCCTCCCTCCTGAAAGGGTACTTTGGGAATGGAATTGTGCTTACAAATTCCGTGTGCCAAGCTGGTGAGTTAACAGAAAAGCCTCTCTCCTTTGGTGTGAGACTCATTCAAGATGCAATCAAGATGGTCACAGACAGCTACATGAGATCAGCAATAGATTATTTTGAAGTGACAAGAGCAAGACCTTCTCTTGCTTGCACCCTTCTCATCACAACATGGTCTAGGCTTTCCTTTCACACCACTGATTTTGGATGGGGAGACCCTGTGCTGTCAGGGCCAGTGTCACTACCAGAGAAGGAAGTGATTTTGTTTCTTTCTCATGGTCAAGAGAGGAGAAACATCAATGTGCTTCTGGGCTTGCCTGCTCCGGTCATGAAGATCTTCCAAGATTTGATGCAGATTTAA 1299 0.4419 MEIANENGFQLSVKLSEPTLVPPAEETKKGLYFLSNLDQNIAVIVRTVYCFKTPERGNEKAGEVIKNALKKVLVHYYPLAGRLTISSEGKLIVDCTGEGALFVEAEANCSMEEIGDITKPDPGTLGKLVYDIPGAKNILQMPPLVAQVTKFKCGGFALGLCMNHCMFDGIGAMEFVNSWGQVARDLPLSIPPVLDRSILKARNPPKIEHLHQEFADIEDKSNTNSLYEDEMVYRSFCFDPERLKQLKMKAMEDGALDICTTFEVLSAFVWIARTKALKMLPDQQTKLLFAVDGRAKFNPSLLKGYFGNGIVLTNSVCQAGELTEKPLSFGVRLIQDAIKMVTDSYMRSAIDYFEVTRARPSLACTLLITTWSRLSFHTTDFGWGDPVLSGPVSLPEKEVILFLSHGQERRNINVLLGLPAPVMKIFQDLMQI 432
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst1g00292 432 FunFam Spermidine hydroxycinnamoyl transferase 11 214 - -
Spst1g00292 432 FunFam Tryptamine hydroxycinnamoyl transferase 218 431 - -
Spst1g00292 432 Gene3D - 8 213 IPR023213 -
Spst1g00292 432 Pfam Transferase family 12 429 - -
Spst1g00292 432 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 19 427 - -
Spst1g00292 432 Gene3D - 214 431 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst1g00292 Spst-Chr1 4093336 4095327 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst1g00292 11 430 Monolignol Biosynthesis Gene Families AT5G48930 33.565 1.06e-79 251
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst1g00292 K15400 - gmx:100804504 835.484