Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst1g00271 ATGGGGGTCTTAGAGGAGAAGCTGTCCTCCTTCTACAAGAGCCGATGGCTGGTGTTCGTGGCCGCAATGTGGTTGCAATCATGGGCGGGTATCGGCTACCTTTTCGGGAGCATATCGCCGGTGATCAAGAGCTCCCTCGGCTACAACCAGAAGCAGCTCGCCATGTTAGGTGTGGCCAAGGACCTCGGCGACGCCGTTGGCTTCGTGACGGGGTTACTCTGTGAGTTGTTACCCATCTGGGGTGCTCTCCTTGTTGGTGCTGCTTTGAATCTCATCGGCTATGGCTGGGTCTGGTTGGTTGTAACAGCTCAAGTTCCAGTTTTGCCTTTGTGGGCTATGTGTGTTCTTATTTTTGTGGGAACAAATGGTGAAACCTACTTTAACACGGTTTCTCTGGTGTCTTGTGTACAAAATTTCCCCAAAAGCCGTGGTCCTGTGGTGGGAATTCTAAAGGGCTTTGCTGGGTTGAGTGGTGCGATCTTGACACAGATATATGCATTGTTCAATGCTCCTGATCGAGCATCATTAATATTTATGGTTGCCGTTGGTCCAGCATTGGTAGGAGTAGGTCTTATGTTCCTTGTTAGGCCTGTTGGTGGTCACAAACAAGTCCGGCCCTCAGATGGAAAATGCTTCACATTTGTGTATGGTGTGTGCCTCCTATTGGCTGCTTATTTGATGGGAGTCATGATTGTCCAAGATCTATTTAAAGTGAGTGAAACTGTAGTAACAATATTCACTGTTATTCTCTTGCTGATCCTTGCTATCCCAATTGTTATTCCCATTACATTGAGTTTTGGCCCTGAGCAAAGGAATCCAGAAGAAGAGGCCCTTCTTCCAGAACCAAGGAATAAAGATCCAGGGAAATCTCAGTTGGATTCTGATGAAGTAATATTGAGTGAGTTGGAAGATGAGAAGCCTAAGGAAGTGGACATGCTCCCTGCATCAGAGAGGCAGAAACGTATAGCGCATTTACAGCAAAGACTGCTCCAAGCAGCTGCAGAAGGAGCAGTGAGGGTTAAGAGGAGGAGGGGACCGCACAGAGGAGAAGATTTCACCTTGACACAAGCACTGATCAAAGCAGACTTTTGGCTTCTTTTCATTTCCATGATCATGGGTTCTGGATCCGGGTTGACTGTAATTGACAATCTGGGTCAAATGAGCCAATCTCTAGGATATGACAATGCACATATATTTGTCTCCATGGTCAGTATTTGGAACTTCCTTGGCCGTGTTGGAGGAGGTTACATATCTGAGCTTGTTGTGAGGGATCATGCGTATCCAAGACCAAGTGCATTGGCTGTGTTTCAACTTATTATGACTCTTGGGCATCTTTTCATTGGTATGGGATGGCCAGGGGCAATGTATGTTGGCACTTTACTAGTTGGACTTGGTTATGGGGCTCATTGGGCAATTGTTCCAGCCACTGCCTCTGAGTTGTTTGGTCTGAGAAACTTTGGTGCATTGTACAATTTCATTACTTTGGCAAACCCAGCAGGAACACTGGTTTTCTCTAGTCTTATTGCCAGCACCATATATGATTCTGAAGCAGAGAAACAACATCCCCAAAGTATGGGATCTTTTCTGGGATTGCAGGTTGCTACTGAGTCTCTGAAGTGTGAAGGTAGCATATGCTTCTTCCTAACTTCCATGATCATGGCAGGATTATGTGTTCTTGGAGCAGCCCTATGCATGGTTCTAGTGTTAAGAACAAGGATTGTTTATGCCAACCTATATGGAAAAACTTCTTCTAGTAGGCTTCGATTGTGA 1770 0.4593 MGVLEEKLSSFYKSRWLVFVAAMWLQSWAGIGYLFGSISPVIKSSLGYNQKQLAMLGVAKDLGDAVGFVTGLLCELLPIWGALLVGAALNLIGYGWVWLVVTAQVPVLPLWAMCVLIFVGTNGETYFNTVSLVSCVQNFPKSRGPVVGILKGFAGLSGAILTQIYALFNAPDRASLIFMVAVGPALVGVGLMFLVRPVGGHKQVRPSDGKCFTFVYGVCLLLAAYLMGVMIVQDLFKVSETVVTIFTVILLLILAIPIVIPITLSFGPEQRNPEEEALLPEPRNKDPGKSQLDSDEVILSELEDEKPKEVDMLPASERQKRIAHLQQRLLQAAAEGAVRVKRRRGPHRGEDFTLTQALIKADFWLLFISMIMGSGSGLTVIDNLGQMSQSLGYDNAHIFVSMVSIWNFLGRVGGGYISELVVRDHAYPRPSALAVFQLIMTLGHLFIGMGWPGAMYVGTLLVGLGYGAHWAIVPATASELFGLRNFGALYNFITLANPAGTLVFSSLIASTIYDSEAEKQHPQSMGSFLGLQVATESLKCEGSICFFLTSMIMAGLCVLGAALCMVLVLRTRIVYANLYGKTSSSRLRL 589
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst1g00271 589 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 16 576 - -
Spst1g00271 589 Gene3D MFS general substrate transporter like domains 361 572 IPR036259 -
Spst1g00271 589 SUPERFAMILY MFS general substrate transporter 212 572 IPR036259 -
Spst1g00271 589 MobiDBLite consensus disorder prediction 274 292 - -
Spst1g00271 589 Pfam Nodulin-like 15 262 IPR010658 -
Spst1g00271 589 SUPERFAMILY MFS general substrate transporter 10 197 IPR036259 -
Spst1g00271 589 CDD MFS_Mch1p_like 14 561 - -
Spst1g00271 589 MobiDBLite consensus disorder prediction 273 292 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst1g00271 Spst-Chr1 3770816 3774469 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst1g00271 5 584 Nodulin-like Gene Family AT5G14120 70.326 0.0 826
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst1g00271 - - gmx:100796700 1038.48