Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst1g00270 ATGGAGATGATCATGAGGATAGTGCTAATGGCTTTGTTGTTGGCTTTCACGATGCTTATATCTAAGGGAGAAGGCCAATTATCAGAGAATTTCTATAGTTCATCGTGTCCAAACGTGGAATCCATCGTGTCCCAAGCAGTGACTAACAAGTTTACTCAGACCCTCACAACTGGACAAGCAACCCTGCGTCTGTTTTTCCATGATTGCTTTGTTGAGGGATGTGATGCCTCTGTGATAATTTCGTCGCCAAATGGGGACGCAGAGAAGGATAACGCGGAAAATCTTTCCCTTCCAGGAGATGGGTTTGACACTGTGGTCAAGGCAAAGCAAGCAGTGGAAGCTTCATGCCCTGGTGTGGTTTCATGTGCAGACATTTTGGCACTAGCCACCAGAGACGTCATAAGCTTGCTTGGAGGTCCTTCATTCAATGTAGAGCTTGGACGCAGAGACGGGCTTATTTCCAAGGCATCTCTCGTAGATGGAAAGCTCCCCAAAGCGAGCTTCAACTTGGACCAACTGAACGCGCTTTTCCAGAAGCACAACCTGACCCAAACGGACATGATAGCCCTCTCCGGGGCCCACACCGTAGGGTTCTCGCACTGCGATCAGTTCACCAACCGTTTATACTCCTTCTCATCCTCCAATCCGGTGGACCCCACTCTGGACTCCACCTTCGCCCAGAATCTCATGGGGGACTGCCCCAGAAACGTCGACCCCAGCGTCGTGATCCCGCTGGACCTGCAATCCCCTGCGGCGTTCGACAACCTCTATTACAAAAACCTCGTATCCGGAAAAGGACTGCTAACCTCCGACCAGGTGCTGTTCACGGACGCCGCCTCGCAGCCCACGGTGGTTGGGTTCGCGAACAACCCTGGGGACTTCAACGAAGCGTTTGTGACGGCCATGAGGAAGCTGGGAAGGGTCGGGGTCAAGACTGGGAACGAGGGGGAGATAAGGAGAGATTGCACGTCCTTCAATTCATGA 984 0.5224 MEMIMRIVLMALLLAFTMLISKGEGQLSENFYSSSCPNVESIVSQAVTNKFTQTLTTGQATLRLFFHDCFVEGCDASVIISSPNGDAEKDNAENLSLPGDGFDTVVKAKQAVEASCPGVVSCADILALATRDVISLLGGPSFNVELGRRDGLISKASLVDGKLPKASFNLDQLNALFQKHNLTQTDMIALSGAHTVGFSHCDQFTNRLYSFSSSNPVDPTLDSTFAQNLMGDCPRNVDPSVVIPLDLQSPAAFDNLYYKNLVSGKGLLTSDQVLFTDAASQPTVVGFANNPGDFNEAFVTAMRKLGRVGVKTGNEGEIRRDCTSFNS 327
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst1g00270 327 PANTHER - 5 326 IPR000823 GO:0004601|GO:0006979|GO:0020037
Spst1g00270 327 FunFam Peroxidase 164 305 - -
Spst1g00270 327 FunFam Peroxidase 30 175 - -
Spst1g00270 327 PRINTS Haem peroxidase superfamily signature 58 72 IPR002016 GO:0004601|GO:0006979|GO:0020037
Spst1g00270 327 PRINTS Haem peroxidase superfamily signature 246 261 IPR002016 GO:0004601|GO:0006979|GO:0020037
Spst1g00270 327 PRINTS Haem peroxidase superfamily signature 186 201 IPR002016 GO:0004601|GO:0006979|GO:0020037
Spst1g00270 327 PRINTS Haem peroxidase superfamily signature 120 137 IPR002016 GO:0004601|GO:0006979|GO:0020037
Spst1g00270 327 PRINTS Haem peroxidase superfamily signature 138 150 IPR002016 GO:0004601|GO:0006979|GO:0020037
Spst1g00270 327 Pfam Peroxidase 44 290 IPR002016 GO:0004601|GO:0006979|GO:0020037
Spst1g00270 327 ProSitePatterns Peroxidases proximal heme-ligand signature. 186 196 IPR019793 -
Spst1g00270 327 ProSitePatterns Peroxidases active site signature. 58 69 IPR019794 GO:0004601
Spst1g00270 327 CDD secretory_peroxidase 26 325 IPR033905 GO:0004601|GO:0042744
Spst1g00270 327 PRINTS Plant peroxidase signature 138 153 IPR000823 GO:0004601|GO:0006979|GO:0020037
Spst1g00270 327 PRINTS Plant peroxidase signature 300 313 IPR000823 GO:0004601|GO:0006979|GO:0020037
Spst1g00270 327 PRINTS Plant peroxidase signature 36 55 IPR000823 GO:0004601|GO:0006979|GO:0020037
Spst1g00270 327 PRINTS Plant peroxidase signature 60 80 IPR000823 GO:0004601|GO:0006979|GO:0020037
Spst1g00270 327 PRINTS Plant peroxidase signature 260 277 IPR000823 GO:0004601|GO:0006979|GO:0020037
Spst1g00270 327 PRINTS Plant peroxidase signature 100 113 IPR000823 GO:0004601|GO:0006979|GO:0020037
Spst1g00270 327 PRINTS Plant peroxidase signature 119 129 IPR000823 GO:0004601|GO:0006979|GO:0020037
Spst1g00270 327 PRINTS Plant peroxidase signature 185 197 IPR000823 GO:0004601|GO:0006979|GO:0020037
Spst1g00270 327 PRINTS Plant peroxidase signature 244 259 IPR000823 GO:0004601|GO:0006979|GO:0020037
Spst1g00270 327 SUPERFAMILY Heme-dependent peroxidases 26 326 IPR010255 GO:0004601|GO:0006979|GO:0020037
Spst1g00270 327 Gene3D - 30 326 - -
Spst1g00270 327 ProSiteProfiles Plant heme peroxidase family profile. 26 326 IPR002016 GO:0004601|GO:0006979|GO:0020037
Spst1g00270 327 Gene3D Peroxidase, domain 2 164 305 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst1g00270 Spst-Chr1 3764338 3767399 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst1g00270 5 326 Peroxidase AT5G14130 62.112 3.04e-143 407
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst1g00270 K00430 - gmx:100791275 568.926