Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst1g00269 ATGGCGATGGAAGTGGAGAACAATCAGAATCAGCAATTAGGGTTTCCCTTCTGGAAACCGCTCCGTCGCAAGTTCGGACCCGACACTCCTTTCTTCGCTCCCGGTAACCTCGAACGAGAGCTGCTTGCCAAACAGGTTGCTTTGGAATTGACAGAAGAGAAGCAACAGCTCGAGAAATGGATGCAAGAGGAAGATGGAAGGGAAATATTTTGTCCCATTGTTGGTTGTGGTGCACGCTTGACTTCAATGGATGACTTCGAAAATCACTATAATGCAAGGCATACTGCATCCTGCTCTGTGTGCTCCAGAGTCTACCCAACATCTCGGTTGCTCAGCATACATGTATCTGAAGTTCATGATTCTTTCTTTCAGGCAAAAGTTGCACGCGGTTACGATATGTATGAATGCTTGGTGGAAAGGTGTGGTTTGAAATTCAAAAGCTACAATAGTAGGCATCAGCATCTGGTTGACAAGCATAAATTCCCCACCTCATTTGAGTTTTTCAAGAAGGCTAAACCTTCAAAGAAACAGAGATTGAAGTCCCAACACAAACAATCTGTCCCTAAGGACGATGCTGCGGGAATGATGGAAGTGGAAAATGCAGCCATGGATGACCTTGTTTCAGCAGTCTCTAAATTGAGCACTTCTGACTCCACCCCTTCATCTATCAGTTTTGGTCGCCGCAGCAAAGGCTTGTCATTCATCCCTCGAACTGTTCAGCGTGGAGATCGATCAAACTCAGCAGCGTCTGTGACAAAGAGATAA 765 0.4575 MAMEVENNQNQQLGFPFWKPLRRKFGPDTPFFAPGNLERELLAKQVALELTEEKQQLEKWMQEEDGREIFCPIVGCGARLTSMDDFENHYNARHTASCSVCSRVYPTSRLLSIHVSEVHDSFFQAKVARGYDMYECLVERCGLKFKSYNSRHQHLVDKHKFPTSFEFFKKAKPSKKQRLKSQHKQSVPKDDAAGMMEVENAAMDDLVSAVSKLSTSDSTPSSISFGRRSKGLSFIPRTVQRGDRSNSAASVTKR 254
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst1g00269 254 ProSitePatterns Zinc finger C2H2 type domain signature. 136 159 IPR013087 -
Spst1g00269 254 MobiDBLite consensus disorder prediction 234 254 - -
Spst1g00269 254 Coils Coil 43 63 - -
Spst1g00269 254 ProSitePatterns Zinc finger C2H2 type domain signature. 98 119 IPR013087 -
Spst1g00269 254 MobiDBLite consensus disorder prediction 239 254 - -
Spst1g00269 254 ProSitePatterns Zinc finger C2H2 type domain signature. 71 94 IPR013087 -
Spst1g00269 254 SMART c2h2final6 96 119 IPR013087 -
Spst1g00269 254 SMART c2h2final6 134 159 IPR013087 -
Spst1g00269 254 SMART c2h2final6 69 94 IPR013087 -
Spst1g00269 254 PANTHER UNCHARACTERIZED 11 242 IPR039258 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst1g00269 1 250 C2H2 Transcription Factor Family AT5G14140 61.154 5.33e-113 323
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Spst1g00269 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst1g00269 - - gmx:100819557 453.751