Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst1g00260 ATGAGAGCTAAGATCATCTTTCACAGTGCTCTCCATATTACTCATTCTCATGGTAACATGGAAGCATTCATCATCCTCCTTTACTTGGAGCCACTCCTCTCCTTCTTCTTCCTCCTCATTCTCTTCTACATCGTGCTTTCTGAATTCAGGCGACCGAAGAAATTCTCCGGCGCCGGTCCGGCTACCTATCCCCTCATCGGATGCCTCATATCCTTCTACAAGAACAAGCACCGGTTACTAGATTGGTACACAGAGTTACTAGCTCAGTCCCCCACCAATACCATAGTGGTTCAAAGGCTTGGTGCACGTAGAACCATTGTGACTGCAAACCCTCAAAATGTTGAGTACATACTCAAGACAAACTTCAACAACTTCCCAAAAGGCAATCCCTTCACTGAGATCCTTGGTGATTTCCTTGGCCAGGGGATTTTCAACGTGGATGGTGAACTGTGGCTTACACAGCGTAGAGTTGCGAGCCATGAGTTCTCTGCCAAGTCCATGAGGGAGTTTGTCATGCACACGTTGGAGAGGGAAGTGTGTGAGAGGCTTTTGCCTATGCTTGACACACTGTCTGATGAGAACAAGGTGGTTGACTTGCAAGAGTTGCTAGGGAGATTCTCATTCAATGTGATCTGCAAGTTCACACTGGGGACTAATAGGTGCTGTTTGGACCCTTCTGTCCCTACTTGTTCCCTTGCAAGGGCCTTTGATGTAGCTGCAGAGGTGTCTGCGAGGCGTGGGGCAGCACCTTTGTTCATCATCTGGAGGGTGAAGAGATGGCTTGCTGCTGGATCTGAAGGATTGCTTAAAAATGCTGTTGGGGAGGTTCAGAGTCATGTCATGAGAATGATTCAGGAGAGGAAGGAGAAGGGAGAGGAGAGTGAGAAAAATAGTGGTGTTGAAGATCTCTTGTCAAGGCTTATATGTGCAGGTCACAAGGAGGAGTTGATTAGAGACATGGTGATAAGTTTCATTATGGCAGGGAGGGACACTACTTCAGCAGCTATGACATGGTTCTTCTGGATACTGTCACATTATTCCCACGTGGAGAAACAGATAGTGGAAGAGGCAAAAGGGGTGTTGGATTATGAATCACTGAAGAATTTGAGCTTCTTGAAGGCATGTTTGTGTGAGTCCATGAGGCTGTATCCCCCAGTGGCATGGGACTCCAAGCATGCCAGTGACGGTGATGTGTTGCCAGATGGCACTGTGGTCAAGGCAGGAGATAGGGTCACATATTTTCCCTATGGAATGGGGAGAATGGAAGCTTTGTGGGGGAAGGACTGGTTTGAATTCAGACCAGATCGATGGTTTGTGGAACCAGGAAACAGTGAGGGAATAACGTTGAGTGAGGTTTCTCCTTTCATATTTCCAATTTTTCAGGCTGGTCCAAGGGTGTGTCTTGGCAAGGAAATGGCCTTCATTCAAATGAAGTATGTGGTGGCTTCAATTCTAAGCCGATTCAAATTTAGAATTGTTGGTCCAGAGAGGCCTATATTCGTGCCACTACTCACGGCACACATGGCTGGCGGCTTAAGAGTATTGGTTTGTAAAAGGGAAAAACTGAGTTAG 1572 0.4695 MRAKIIFHSALHITHSHGNMEAFIILLYLEPLLSFFFLLILFYIVLSEFRRPKKFSGAGPATYPLIGCLISFYKNKHRLLDWYTELLAQSPTNTIVVQRLGARRTIVTANPQNVEYILKTNFNNFPKGNPFTEILGDFLGQGIFNVDGELWLTQRRVASHEFSAKSMREFVMHTLEREVCERLLPMLDTLSDENKVVDLQELLGRFSFNVICKFTLGTNRCCLDPSVPTCSLARAFDVAAEVSARRGAAPLFIIWRVKRWLAAGSEGLLKNAVGEVQSHVMRMIQERKEKGEESEKNSGVEDLLSRLICAGHKEELIRDMVISFIMAGRDTTSAAMTWFFWILSHYSHVEKQIVEEAKGVLDYESLKNLSFLKACLCESMRLYPPVAWDSKHASDGDVLPDGTVVKAGDRVTYFPYGMGRMEALWGKDWFEFRPDRWFVEPGNSEGITLSEVSPFIFPIFQAGPRVCLGKEMAFIQMKYVVASILSRFKFRIVGPERPIFVPLLTAHMAGGLRVLVCKREKLS 523
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst1g00260 523 PRINTS E-class P450 group I signature 336 362 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst1g00260 523 PRINTS E-class P450 group I signature 467 490 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst1g00260 523 PRINTS E-class P450 group I signature 457 467 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst1g00260 523 PRINTS E-class P450 group I signature 316 333 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst1g00260 523 PANTHER CYTOCHROME P450 44 513 - -
Spst1g00260 523 PRINTS P450 superfamily signature 327 344 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst1g00260 523 PRINTS P450 superfamily signature 458 467 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst1g00260 523 PRINTS P450 superfamily signature 467 478 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst1g00260 523 PRINTS P450 superfamily signature 374 385 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst1g00260 523 CDD CYP86A 94 512 - -
Spst1g00260 523 Pfam Cytochrome P450 59 493 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst1g00260 523 SUPERFAMILY Cytochrome P450 58 519 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst1g00260 523 Gene3D Cytochrome P450 49 514 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst1g00260 Spst-Chr1 3628150 3629721 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst1g00260 57 520 Cytochrome P450 AT3G01900 58.599 0.0 575
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst1g00260 K20665 - gmx:100786130 851.662