Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst1g00231 ATGGTTGAGCTTTTGGCTGTGATACTAACTCTCTTCTCAGGCCTTGCCTTTGTGTATCTTCTCAAATATGTTACCAAAAGTAAACAAGATTTCCCACAAAAACTGCCCCCTGGAAGCATGGGGTGGCCCTTTTTGGGGGAGACACACGGCTTTCTCAAGTCTCATAGATCAAACTCCTTGGGAAGCTTCTTACAAGAACATTGCTCTAGGTACGGGAAAGTGTTCAAGTCGCATCTGTTTGGTTCTCCCGCCATAGTTTCATGTGACTTTGAGTTCAACATGTATGTTCTTCAGAATGAAAGGAAGTTACTCCCTGTTGATTACCCCAAGGTGATGCATAACATCCTGGGGAAGTTCTCTCTCATTCTTGTCAAAGGAGACCTTCACAGGAAGCTAAGAAGTACCGTTATTAGTTTTGTCAGTGCAACAAAGTACGAAACCCAATTTCATCGCTGTGTGGAAATGCTTGTACTTTCAAGGATTAATTCTTGGGATACAAACTCCAAACAAGTTGCTTTCTATAAAGAAGCTAAAAGGTTTACGATCAATGTTATGATGAAACACCTACTAGACATTAATCCTTATGACACAGTAGCCTCCAAGATTCTTGAAAACTTTGAGAACTACATCAAAGGATTTATTTCATTGCCGATAAATATACCCGGGACTGCATATTTCAAAGCTTTGCAGGCTAGAATAAGACTTACGGCCATTATCAAAGGTATTATAGTTGAGAGACGAAAATGTAATCATGTGAGGCCTGCGCAAGGAGGGGACCTCTTGAATGTGATCTTGTCAAAGGATAATCTAAGTACTGAAGAGATGGTGAGCCTTGTGTTAGACCTCTTGTTTGGAGGTTATGAGACAACTGCAAAACTTTTATCCTTGATTGTCTATTTCCTTGGTGGAGCCTCTAATGCTTTACAAAGGTTGAAGGAAGAACATCAAGAGATAAGGAAAAGAAAAAAGGAAGGGGAACCACTTAACTGGGATGATTATAAGCAAATGGAGTTCACTCAAAATGTGATAAACGAAGCCATGAGATGTGGTAATGTAGTCAAATTTTTGCACAGGAAAGCCGTTGAAGATGTCAAATTCAAAGATTATGTGATACCCGCAGGATGGAAGGTTCTTCCTGTCTTGTCTTCTGGACATTTGGATCCCACCCTTTTTGAAAATCCTTTGGAGTTCGATCCCTTTCGGTGGGATGACAATTCGACAAGCAAGCAAGTGGCACCATTTGGTGGGGGTCCACGATTCTGTCCAGGGGCTGATCTTGCAAAATTGGAGACAGCATTCTTCCTCCATCATCTTGTCCTTAATTATAGATGGAAAATCAAGGGTGATGATCCCCCACTTGCTTTACCGTATGTGGAATTCACAGGAGGGCTGCTATTGGATCTTGAACCCACAGGCTGA 1419 0.4158 MVELLAVILTLFSGLAFVYLLKYVTKSKQDFPQKLPPGSMGWPFLGETHGFLKSHRSNSLGSFLQEHCSRYGKVFKSHLFGSPAIVSCDFEFNMYVLQNERKLLPVDYPKVMHNILGKFSLILVKGDLHRKLRSTVISFVSATKYETQFHRCVEMLVLSRINSWDTNSKQVAFYKEAKRFTINVMMKHLLDINPYDTVASKILENFENYIKGFISLPINIPGTAYFKALQARIRLTAIIKGIIVERRKCNHVRPAQGGDLLNVILSKDNLSTEEMVSLVLDLLFGGYETTAKLLSLIVYFLGGASNALQRLKEEHQEIRKRKKEGEPLNWDDYKQMEFTQNVINEAMRCGNVVKFLHRKAVEDVKFKDYVIPAGWKVLPVLSSGHLDPTLFENPLEFDPFRWDDNSTSKQVAPFGGGPRFCPGADLAKLETAFFLHHLVLNYRWKIKGDDPPLALPYVEFTGGLLLDLEPTG 472
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst1g00231 472 PRINTS P450 superfamily signature 412 421 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst1g00231 472 PRINTS P450 superfamily signature 421 432 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst1g00231 472 PRINTS P450 superfamily signature 341 352 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst1g00231 472 PRINTS P450 superfamily signature 285 302 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst1g00231 472 Coils Coil 301 324 - -
Spst1g00231 472 SUPERFAMILY Cytochrome P450 31 451 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst1g00231 472 CDD CYP90-like 67 470 - -
Spst1g00231 472 FunFam Cytochrome P450 724B1 30 469 - -
Spst1g00231 472 PRINTS E-class P450 group I signature 421 444 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst1g00231 472 PRINTS E-class P450 group I signature 68 87 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst1g00231 472 PRINTS E-class P450 group I signature 380 404 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst1g00231 472 PRINTS E-class P450 group I signature 411 421 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst1g00231 472 PRINTS E-class P450 group I signature 274 291 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst1g00231 472 PANTHER CYTOCHROME P450 26 33 446 - -
Spst1g00231 472 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 414 423 IPR017972 GO:0005506|GO:0016705
Spst1g00231 472 Gene3D Cytochrome P450 24 459 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst1g00231 472 Pfam Cytochrome P450 36 454 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst1g00231 Spst-Chr1 3238622 3241745 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst1g00231 40 366 Cytochrome P450 AT5G14400 53.614 3.48e-125 365
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst1g00231 K12639 - gmx:100791737 832.017