Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Spst1g00184 | ATGGCAGTTAATGGAGAACAAAAACGCACCTCCAGAAACCAAAAGATCCCATTAGCAGATTCCAATGGCCAAAACATGGCCACCCTTTTGAGCCCAGGGTTCAAATCTGCTGCTGCTATGGCTGGTTGGGATGAAGAGGCACTGTTATTGGCCAGCCTCATCGTTGAAGACACGCCAGATCGAGATTCCAAGCACAAGAAACGCTCTCTTCTGAACTCCAAATCTCCAGCCACCAACTCATCAAGGAAACGTAGAGCTCGGAGGACTCCACAACAACCAATCCCTGTAATTCTTGATCTTGATTCAGAAGAAACCCCCAGAAAAGAGAGTGGGAGAAAGAAGAAAGAAAAAAAGGCTTGTGTTAATAATGAGGGAAGCAAAGTAGGAGGGGATGGGAATGAATGGAAAGAGAAGAACGCGAGGGTCCCTTCTTCTAGTTCAGCTCTTCCCTGCATTGATAAACTTAGGGACGAGCTTTCCTGTGCTATTTGTTTGGAAATATGCTTTGAGCCAAGTACCACTCCTTGTGGTCACAGCTTCTGTAAAAAATGTCTACGATCTGCGGCAGACAAGTGTGGCAAAAAGTGCCCCAAATGCAGGCAATTAATAAGCCATGGACGATCATGCACTGTGAACACAGTCCTCTGGAACACAATCCAGCTCCTGTTCCCCCAAGAAATTGAGGCAAGAAAAGCAGCTGGCTCCTTGAATGGTCGCCACCAAGCTCAAAATCTGAGTCCAGAAACAGCATTCTATGCTAACCTAAGGAATACAAAAACACAACCTTCTAGTGTGGCATCAAGCAGAAACATGAATTCAAGGAGGAGTGTGGCAACAACATCAACGCAGGTGGATGGTGATGATGCATTGGCTAGGAGGTTGCAGAGAGAAATTGATGAACAAAGCCCGGGAACAACTCGAACTCGGGTTCACACTGGAAGAGTAAGGGAAAGAAGAGGTGTTTCTACTAGCCAAGATGAGGATGCAGCTTTGGCTCTAAGGTTGCAGAGAGAGGAGTTCATCCAAGCTTTTAGGAGGGGGAGCAACCAGGAACAGGGTGTTAGGTTACCTTCATCATCATTAGCAAATTTGAGGGCTATGGCATCTAGAGCCATGAATCCTAGGACTAGTGATAGAAGGAGATAA | 1146 | 0.4625 | MAVNGEQKRTSRNQKIPLADSNGQNMATLLSPGFKSAAAMAGWDEEALLLASLIVEDTPDRDSKHKKRSLLNSKSPATNSSRKRRARRTPQQPIPVILDLDSEETPRKESGRKKKEKKACVNNEGSKVGGDGNEWKEKNARVPSSSSALPCIDKLRDELSCAICLEICFEPSTTPCGHSFCKKCLRSAADKCGKKCPKCRQLISHGRSCTVNTVLWNTIQLLFPQEIEARKAAGSLNGRHQAQNLSPETAFYANLRNTKTQPSSVASSRNMNSRRSVATTSTQVDGDDALARRLQREIDEQSPGTTRTRVHTGRVRERRGVSTSQDEDAALALRLQREEFIQAFRRGSNQEQGVRLPSSSLANLRAMASRAMNPRTSDRRR | 381 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Spst1g00184 | 381 | MobiDBLite | consensus disorder prediction | 101 | 122 | - | - | |
Spst1g00184 | 381 | MobiDBLite | consensus disorder prediction | 59 | 139 | - | - | |
Spst1g00184 | 381 | MobiDBLite | consensus disorder prediction | 300 | 323 | - | - | |
Spst1g00184 | 381 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 104 | 230 | IPR013083 | - | |
Spst1g00184 | 381 | ProSitePatterns | Zinc finger RING-type signature. | 176 | 185 | IPR017907 | - | |
Spst1g00184 | 381 | MobiDBLite | consensus disorder prediction | 1 | 29 | - | - | |
Spst1g00184 | 381 | PANTHER | UNCHARACTERIZED | 324 | 373 | - | - | |
Spst1g00184 | 381 | Pfam | Zinc finger, C3HC4 type (RING finger) | 161 | 199 | IPR018957 | GO:0046872 | |
Spst1g00184 | 381 | ProSiteProfiles | Zinc finger RING-type profile. | 161 | 200 | IPR001841 | - | |
Spst1g00184 | 381 | SMART | ring_2 | 161 | 199 | IPR001841 | - | |
Spst1g00184 | 381 | MobiDBLite | consensus disorder prediction | 259 | 284 | - | - | |
Spst1g00184 | 381 | SUPERFAMILY | RING/U-box | 153 | 224 | - | - |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Spst1g00184 | 89 | 204 | C3H Transcription Factor Family | AT5G48655 | 27.517 | 5.84e-08 | 50.8 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Spst1g00184 | - | - | gmx:102666585 | 525.398 |