Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst1g00180 ATGTACGAATGTATCTTTCCATTCCCATCACCACCAACTGTTCTCAACCCGCCATCGAACTCAACCACCGTCACATGTTCATCAATTTTCTTTCCCTTAAACCCTAAATCGTCCCATTCTCAATCAATTTTGCCGTATCAAGGTTCAGCAGAAGGTACAGATAGTTTAGGAAGAAATAGAAAGAAGGTGAGAAAGGAAGAGAGAGAGTGTTACAGTGGAGGAAGTTGTGGTGAGAGAGAAATGCCAAGTGTGGCTGTGAAGCTCTATAGCGTGTTCTTCAAGTTCCTCTTGAAGCACCGATTGCAGAACCGGATCCAAGCATCTTCCCAACACTCCGACCCGTATGGTGTTACCACCCGGCCTGAAGAATCTGTTGCCGCTGCTAACCCCTCCTTTTCCGACGGCGTCGCCACCAAAGACATTCACATCGATCCCTTAACCTCTCTCTCCATCCGAATCTTCCTGCCCGAGTTGGCCCTCACCGCTCCCGAGCCGCATTCCAAGCCTAAGCCCCGTTCCAGTCATCAACCTCAGCCTCGATCCGCGCGCCTCGATTTGATTGAGCGGAGGAACAGCTACGGGCCGCCGCTCATCGATGAGCGACGGAATAGCAGTTTCGGAAGGGGCTCCGGTATGGAGGGTTTGAACCTGATGTCGGACGGTCCGTACCAGGGCTACTCGCCACTGGCGGGAGAGAAGGGGGAGCGGCGGAGGCTGGCGGTGGTCTTGCAGTTCCACGGTGGGGGGTGGGTTAGCGGTGGGAGCGATTCGGTCGCGAACGATGTTTTCTGCCGGCGGATCGTGAAGTTATGTGATGTGATAGTGGTGGCGGTGGGGTACCGGCTGGCGCCGGAGAACCGGTACCCTGCCGCGTTCGAGGACGGCGTGAAGGTGCTGAATTGGCTGGCAAAGCAGGCAAATTTGGCGGAGTGTAGCAGGTCGATGGGGGGTGGGAGGAGTGGGGGGCATGGTGGTGGTGGTAGTGGTGGTGGGGAGTTCAAGAAATCGGATGCTCATAAGCATATTGTTGATTCCTTTGGGGCTTCCGTGGTTGAGCCATGGCTGTCTGCTCACGCTGATCTTTCAAGATGTGTTCTTCTTGGAGCAAGTTGTGGTGCCAATATTGCAGACTACGTGGCTCGTAAAGCTGTGGAAGGAGGCAAACTTCTGGACCCTGTCAAGGTGGTAGCACAGGTTCTAATGTATCCATTTTTCATTGGAAGTGTTCCCACACGGTCTGAAATAAAGTTGGCAAACTCTTACTTTTATGACAAGGCCATGTGTACGGTTGCATGGAAACTTCTCCTACCTGAGGGAGAATTTAGTTTGGACCATCCAGCCGCTAATCCCCTTGTCCCGGGCCGGGGTCCTCCTTTAAAGTTGATGCCTCCAACATTGACAGTTGTGGCCGAACATGACTGGATGAGGGATCGTGCCATTGCTTACTCAGAGGAGCTCCGGAAGGTGAATGTGGATGCACCTGTTCTTGAGTATAAGGATGCTGTACATGAATTTGCTACACTTGATGTCCTTCTCAAAAGCCCTCAGGCCCAGGTTTGTGCTGAGGACATAGCCATATGGGTCAAGAAATATATTTCACTTCGGGGTCATGAATTCTCATATTGA 1626 0.524 MYECIFPFPSPPTVLNPPSNSTTVTCSSIFFPLNPKSSHSQSILPYQGSAEGTDSLGRNRKKVRKEERECYSGGSCGEREMPSVAVKLYSVFFKFLLKHRLQNRIQASSQHSDPYGVTTRPEESVAAANPSFSDGVATKDIHIDPLTSLSIRIFLPELALTAPEPHSKPKPRSSHQPQPRSARLDLIERRNSYGPPLIDERRNSSFGRGSGMEGLNLMSDGPYQGYSPLAGEKGERRRLAVVLQFHGGGWVSGGSDSVANDVFCRRIVKLCDVIVVAVGYRLAPENRYPAAFEDGVKVLNWLAKQANLAECSRSMGGGRSGGHGGGGSGGGEFKKSDAHKHIVDSFGASVVEPWLSAHADLSRCVLLGASCGANIADYVARKAVEGGKLLDPVKVVAQVLMYPFFIGSVPTRSEIKLANSYFYDKAMCTVAWKLLLPEGEFSLDHPAANPLVPGRGPPLKLMPPTLTVVAEHDWMRDRAIAYSEELRKVNVDAPVLEYKDAVHEFATLDVLLKSPQAQVCAEDIAIWVKKYISLRGHEFSY 541
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst1g00180 541 MobiDBLite consensus disorder prediction 162 182 - -
Spst1g00180 541 MobiDBLite consensus disorder prediction 42 61 - -
Spst1g00180 541 PANTHER ARYLACETAMIDE DEACETYLASE 117 506 - -
Spst1g00180 541 Gene3D alpha/beta hydrolase 209 536 IPR029058 -
Spst1g00180 541 Pfam alpha/beta hydrolase fold 242 506 IPR013094 GO:0016787
Spst1g00180 541 SUPERFAMILY alpha/beta-Hydrolases 128 532 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst1g00180 Spst-Chr1 2614256 2619096 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst1g00180 81 541 Carbohydrate Esterase AT3G27320 72.354 0.0 653
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst1g00180 - - gmx:100775445 777.319