Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Spst1g00138 | ATGCCTGAAGTGGATCAGAATACCGGCAGTGAGCATGAGGTGGAGGAAACAGTTGAGGCAGAAGTACACGGTGGCAAAGAGGCGATTGTTACTCAGAAGTGGCCTAGGTGGCTTGGGGAGAGTGTGTGTCGGATGTTAGTTTCTGCACAAAAGGGTCTTTCTCTAAATGCTGATGGAGGTCTTGGTTTTGGACCTGCTTCTCAATATATGCCACCTCCACAACAACTCGAAAGTTATTATCTAACAGCCGAGATCCCTCATCTAGTTGAAAGACAACCCCATCAAGGAGCGAGTATAAGATTTCTTATTCTTCTAGTTCTTCGAGTATTTCCTGGAATTGATATGCTTCGCCTCAGTCTTCACCCAAAATCTAAGTGTGATGAGGATGTTGAGTATTATAAGAATTTGGCTTCAGGCTATAGCTCCCAAGAGGGATCAAAGATAAAGACAATATTTACATTGTATCAGCTCACAAGTATTATGGCTCTTTCCTTTGATACATTGCAAGGTGGTGATTCTGTTCTGATTACTTTGGAACCAATGTGGGTGTTAGAGGACTTTTGGGGGGCCGGGATGGATGGGGCGGGGATCATTGAGCATATTTTGGGGACCTCATATGTACTTGTCAAGGATTGTTCGATCAAGACTATAATTGTGCCATCTCAATACAGAGGCACAGGTCGCAGGGGTGGTAGATCATTTAGAGGCTATGGTCGTGGTCGATTCAATCACCACCGTGGTAGGGGACGTGGTAGGGGTCCTGGTAGACAGATCTCATCTCATTCTTCTGAAGCCACTATTGCTAATGAACCAGATGTGCCTGCTGCTGATGGGGCCACTTCGGTGATGCAACCATCATCAGTCTCTGGGCAATCATCATTACCTAATCCCGCACAAGTTCCATCTGCACCATTTCAGGCACCACCACGTAAGTTATGGTGTGAAATTTGCAAGGCCGAGTGCAATACTCCAGAAATGTTGGAGCAGCATACAAATGGAAAGCGGCATAGGAAGAACTTGCTAGTTCATGAAGAAGTACAAAGACTCAAAGCTCTAAACGGACAACAGAGTGAAAATATTTTTACTTCTGAATCAAATTTAACAATCCAACCTGAGAAAGTTGAATCTGCGATAAAAGGATTAGCAGAAGAAAAAGTGGGTTCTGAAGCTCCAATTGATAGTCACAATGATGAAACTGAGCTTCAGAATAATGAAGTTGAGGTTAAAACTGAAGAGCCTCAGGAGGAACCTAGAGAAAACTCTTCCATACAAGGACATGGATTCAAGCGTCTGATGAGCGGAGGCAGAGGAGGTAAATATATGAGGAGTGATGATGGCTCAAGAAAACTAGTGGAACCTCGAAAGCCTAAGCATAAGCAGGTTACATCTCTCATATGTGAGTTGTGCAATGTCAAATGTGATTCCCAAGTTGTCTACAATAGTCATTTGACAGGAAAAAAGCACATGTCAAATTTCAAGCGTGTCCATGGTTACCAGGCTTTGAATGGCGAAGCAGGGATCAAACCAATTCAGTCTCCTGATATTAGTACTGTGTCAAATGCAAATAATTTTCCAGTCCAACAAGGTGTTAGTGTCCCACTGGGAACTAGTGATCCACGGAACCTTCTAGCTCAACTCCTTGCGACTGTGCTATCCAATGTCCAAGTACTGCCAATAGCACCACTGTCATGTCCTGTGGCTGATCAGATACAAGCACCAACATTCATGGCTGGATCAAGTCATGAACCTCCGTCTCAAAAGTTGTCAGAAACACAAGTCTCAGATTCCATGGCACATTTTGGGAGAGAAAATCCTGCTGGTAATATAAAAGATAAGATGTCATCTGTGATATTGCAGCTGGATGAGACTGCAGTTTCAAGTAATAATGGTAACCCTGAAATTGTAGGTGGAAGTCCTGCAAAGGAAGAAACGGCGGTGAAACTTCCCCAGGGTAGTGCAGTTATGACACCAGCAGAAAACCCAGTTGCGGCACATAAACAAATACCTTCATAA | 2013 | 0.4377 | MPEVDQNTGSEHEVEETVEAEVHGGKEAIVTQKWPRWLGESVCRMLVSAQKGLSLNADGGLGFGPASQYMPPPQQLESYYLTAEIPHLVERQPHQGASIRFLILLVLRVFPGIDMLRLSLHPKSKCDEDVEYYKNLASGYSSQEGSKIKTIFTLYQLTSIMALSFDTLQGGDSVLITLEPMWVLEDFWGAGMDGAGIIEHILGTSYVLVKDCSIKTIIVPSQYRGTGRRGGRSFRGYGRGRFNHHRGRGRGRGPGRQISSHSSEATIANEPDVPAADGATSVMQPSSVSGQSSLPNPAQVPSAPFQAPPRKLWCEICKAECNTPEMLEQHTNGKRHRKNLLVHEEVQRLKALNGQQSENIFTSESNLTIQPEKVESAIKGLAEEKVGSEAPIDSHNDETELQNNEVEVKTEEPQEEPRENSSIQGHGFKRLMSGGRGGKYMRSDDGSRKLVEPRKPKHKQVTSLICELCNVKCDSQVVYNSHLTGKKHMSNFKRVHGYQALNGEAGIKPIQSPDISTVSNANNFPVQQGVSVPLGTSDPRNLLAQLLATVLSNVQVLPIAPLSCPVADQIQAPTFMAGSSHEPPSQKLSETQVSDSMAHFGRENPAGNIKDKMSSVILQLDETAVSSNNGNPEIVGGSPAKEETAVKLPQGSAVMTPAENPVAAHKQIPS | 670 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Spst1g00138 | 670 | MobiDBLite | consensus disorder prediction | 387 | 423 | - | - | |
Spst1g00138 | 670 | Pfam | Zinc-finger of C2H2 type | 313 | 336 | - | - | |
Spst1g00138 | 670 | Pfam | Zinc-finger of C2H2 type | 465 | 488 | - | - | |
Spst1g00138 | 670 | MobiDBLite | consensus disorder prediction | 441 | 456 | - | - | |
Spst1g00138 | 670 | MobiDBLite | consensus disorder prediction | 280 | 300 | - | - | |
Spst1g00138 | 670 | MobiDBLite | consensus disorder prediction | 1 | 22 | - | - | |
Spst1g00138 | 670 | SMART | ZnF_U1_5 | 309 | 343 | IPR003604 | GO:0003676|GO:0008270 | |
Spst1g00138 | 670 | SMART | ZnF_U1_5 | 461 | 495 | IPR003604 | GO:0003676|GO:0008270 | |
Spst1g00138 | 670 | MobiDBLite | consensus disorder prediction | 227 | 306 | - | - | |
Spst1g00138 | 670 | SUPERFAMILY | beta-beta-alpha zinc fingers | 296 | 340 | IPR036236 | - | |
Spst1g00138 | 670 | PANTHER | OS06G0651300 PROTEIN-RELATED | 205 | 537 | - | - | |
Spst1g00138 | 670 | MobiDBLite | consensus disorder prediction | 387 | 456 | - | - | |
Spst1g00138 | 670 | SMART | c2h2final6 | 312 | 336 | IPR013087 | - | |
Spst1g00138 | 670 | SMART | c2h2final6 | 464 | 488 | IPR013087 | - | |
Spst1g00138 | 670 | MobiDBLite | consensus disorder prediction | 234 | 252 | - | - | |
Spst1g00138 | 670 | Gene3D | Classic Zinc Finger | 447 | 494 | - | - | |
Spst1g00138 | 670 | Gene3D | Classic Zinc Finger | 302 | 343 | - | - | |
Spst1g00138 | 670 | MobiDBLite | consensus disorder prediction | 623 | 670 | - | - | |
Spst1g00138 | 670 | SUPERFAMILY | beta-beta-alpha zinc fingers | 455 | 495 | IPR036236 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Spst1g00138 | Spst-Chr1 | 2142669 | 2148018 | Dispersed |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | C2H2 | Spst1g00138 | zf-met | 2.7e-06 | CL0361 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Spst1g00138 | - | - | gmx:102666037 | 606.675 |