Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst1g00135 ATGAAGGCCGTGCCCCTACCCTTTCAGGAATTTAGAGGGAACGGGGTGTTAGATTTTGCTTCTGGTGCTGTTGCTGTTTCAGATTCGTTTTTACTTCCACAGCAAGAGCAATTTCTGCAAAGGTGGAACCCCCACAGGGAAAACTATTGCTATGTGGGCATTGAGCCCACTTCTGGTTTGGACCTCAAAAGGAAAACAAGCCCTCCCACATCTTCCTCTACACTGTCTTCCTCACGCGGCAGCAGCGGCGGCGGTGGAGGCTGCGGCTCGACCGATAGCACCACCGGCGCTGGGGCAGCGAAGGTCACGGCTGAGAAGGAGAATAACCCACCTCAAGCAGGGTTAGAGGTTGGACAGGGGAGATGTGGGCTGGGAATGGAGGACTGGGAGAGTGTGTTGTCTGAGTCATCAGGTCAAGATAATTCCATTTTGAAATTGATTATGGGGGGCATTGAGGACCCATCTGTGGGAATGACCAAGCTTTTGCAGGGTGGAAGTGTCTCTCAGGATGTTGAATTTAATGGGGTTGGAGTGGGTTTTAGTTTGGTGGATCACAGTTCTGTGCTTGACCCCATTCCCAGTGTCAACTATGTAACCAGCATTGACCCTTCTGGTCCTGGGAATTGTTCTGATTTCTCTTTCAATTCCCACAGTAATGTTAGCTCCAACATTTCCAGAGTTGGTTCTGGTGTGAATCCAAACCCTGGGTTCCCTGATTCGGCTAGCAATCTCTTACCAGTTACACTCCCACAAGTTGTTTTTCAGCCACAACAGCAGCATCAACCAATAGAGCCTCTGGATGAGAAGCTGCAAGTTCTCAATCCCCAGTTCGTTTTGAACCAGAATCAATCTCAGTTCATGCCAAACCCAGGTTCGGTTTTGCCTTTGACTTATGCACAGCTGCAAGAACAACATCAGCTTCTCCCTCAGCCTCCGGCCAAACGCCTGAATTGTGGCCCAAATTATCAGGTTCCAAAGGCACCCTTTCTGGACTCTGGCCAAGAGCTGTTACTCCGGAGGCAGCAACAGCAGCTTCAACTGCTCCCTCACCATTTGCTGCAGAGGCCATCCATGGTGGTGGCGCCGAAGCAGAAAATGGTGAGCCCCAGTGGCGAAGACTTGGCAACCCACCAGCTTCAGCAGGCTATAACTGAACAGCTTTTCAAAGCTGCAGAGCTGATCGATGCCGGTAATCTGGAACTCGCGCACGGGATATTGGCGCGGCTCAATCACCAACTTTCTCCCTTTGCGAAGCCTTTTCAGAGGGCTGCTTTTTATTTCAAAGAGGCCTTGCAATTAGTACTTCATTCAAATGCCAACAATAGTTCTATGACCTTCTCACCCACTGGCCTTCTGCTCAAGATTGGTGCTTACAAATCATTCTCAGAAATATCACCAGTTCTGCAGTTCGCCAATTTCACTTGTAACCAAGCACTGCTTGAAGCTGTGGAAGGGTTTGATCGCATTCACATAATTGATTTTGATATTGGGTTTGGTGGGCAGTGGTCTTCTTTCATGCAAGAGTTAGCTCTGAGGAATGGAGGTGCACCTGAACTCAGGATCACAGCATTTGGGTCACCCTCCCCCTCCCACCATGATCAAATTGAGCTCAGTTTCACTCGGGAGAATTTGAACCAATATGCTGGCGAGATTAACATGTCCTTTGAGCTTGAGAGTTTGAGCCTTGAGTCTTTAAATTCTGCTTCCTGGCCCCAGCCACTTCGTGACTGTGAAGCTGTGGTGGTTAACATGCCTATTGGCTCATTCTCAAACTACCCATCATATTTTCCTTTGGCCCTTCGCTTTGTGAAGCAGCTCATGCCAAAAATTGTGGTTACATTGGATAGAAGTTGTGATCGAACTGATACCCCATTTCCTCAGCATTTGATTTTTGCACTTCAATCTTATTCGGGGCTGCTTGAATCACTTGATGCCGTTAATGTTCACCCAGATGTCCTTCAGATGATTGAGAAGTATTATCTTCAGCCAGCAATGGAGAAGCTTGTTTTGGGCCGACATGGTTTGCAGGAAAGAACACTTTCTTGGAAAAACCTTCTCTTGTCATCTGGGTTTTCACCATTGACCTTTAGTAACTTCACAGAATCTCAAGCAGAGTGTTTGGTGCAGAGGACTCCGGGTAAGGGATTCCATGTTGAGAAAAGACAGTCTTCCCTTGTTCTCTGCTGGCAAAGGAAGGATCTCATCTCAGTTTCAACCTGGAGATGCTGA 2229 0.4805 MKAVPLPFQEFRGNGVLDFASGAVAVSDSFLLPQQEQFLQRWNPHRENYCYVGIEPTSGLDLKRKTSPPTSSSTLSSSRGSSGGGGGCGSTDSTTGAGAAKVTAEKENNPPQAGLEVGQGRCGLGMEDWESVLSESSGQDNSILKLIMGGIEDPSVGMTKLLQGGSVSQDVEFNGVGVGFSLVDHSSVLDPIPSVNYVTSIDPSGPGNCSDFSFNSHSNVSSNISRVGSGVNPNPGFPDSASNLLPVTLPQVVFQPQQQHQPIEPLDEKLQVLNPQFVLNQNQSQFMPNPGSVLPLTYAQLQEQHQLLPQPPAKRLNCGPNYQVPKAPFLDSGQELLLRRQQQQLQLLPHHLLQRPSMVVAPKQKMVSPSGEDLATHQLQQAITEQLFKAAELIDAGNLELAHGILARLNHQLSPFAKPFQRAAFYFKEALQLVLHSNANNSSMTFSPTGLLLKIGAYKSFSEISPVLQFANFTCNQALLEAVEGFDRIHIIDFDIGFGGQWSSFMQELALRNGGAPELRITAFGSPSPSHHDQIELSFTRENLNQYAGEINMSFELESLSLESLNSASWPQPLRDCEAVVVNMPIGSFSNYPSYFPLALRFVKQLMPKIVVTLDRSCDRTDTPFPQHLIFALQSYSGLLESLDAVNVHPDVLQMIEKYYLQPAMEKLVLGRHGLQERTLSWKNLLLSSGFSPLTFSNFTESQAECLVQRTPGKGFHVEKRQSSLVLCWQRKDLISVSTWRC 742
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst1g00135 742 ProSiteProfiles GRAS family profile. 374 741 IPR005202 -
Spst1g00135 742 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 346 737 IPR005202 -
Spst1g00135 742 Pfam GRAS domain family 384 741 IPR005202 -
Spst1g00135 742 MobiDBLite consensus disorder prediction 63 98 - -
Spst1g00135 742 MobiDBLite consensus disorder prediction 60 120 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst1g00135 Spst-Chr1 2100506 2102734 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst1g00135 383 742 GRAS Transcription Factor Family AT4G00150 59.229 7.44e-138 416
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Spst1g00135 GRAS 5.4e-90 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst1g00135 - - gmx:100792973 1181.78