Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst1g00125 ATGCTGTCACTTTTGTTCTTGCTGTTAGGATTTCCTGTGATTGTAGTAATCCTCTTGAAGAATCATGGAGCCAAAAAGAAGCCATCAGGACCTCATCCACCAGGACCAAGAGGCCTTCCCATCATCGGTAATCTTCACCAACTTGACAGTTCAAACCTGAATTTTCAACTGTGGCAGTTCTCAGAGATCTATGGTCCCCTTTTCTCCCTCCAAATTGGCTTCAAGCAGGCCATTGTTGTTTCCTCTCCAAAACTAGCCAAGGTAGTCCTCAAAGACCATGATCGTGATGTTTGCACCAGACCTCCCTCGCATGGCCCTCTAAAATTGACTTACAATGGGCAAGAGATGATTTTCTCTCCCTACAACGACTACTGGAGAGAAATTAGAAAAATCTTGGTGGTCCATTTCTTCAGCTCCAAACGGATCTCCACCTTCTCCAATGTGAGAAAATCGGAGGTCAAGCAAATGGTGGAGATTGTATCTGGCCACGTTCGTTATTCCAAAGTAACCAACTTGAGTGAAGTCCTAATGTCGATCACAAGCGGTATTACTTGTAGGATTGCATTTGGGAGGAAGTACGATGGGGAAGGAGCTGAGAGAAGCAGGTTCCATGGGATGCTCAATGACTCACAGGCTATGTTGCTTTCCTTTTTTGTCTCAGATTACATTCCCTTCTTGGGGTGGATTGATAAACTCACCGGCATGCTTGGCCGTCTTGAAAAAACTTTCAAGGCCCTGGATGTGTTCTTCCAAGAAGTCGTTGACGACCACCTCGATCCTAATAGGGTCAAACAAAATGAAGAGGATGATGATATTGTTGATGTGTTGCTTGAGCTTAAGAAGCAGGGTCGCTTGGCAATAGATCTCACCCATGATCAAATCAAAGCTATCATCTTGGACATACTAGTAGCAGGTACCGACACAACGGCAGCTACATCCGTGTGGGCGATGACTGGATTGATGAAGAACCCAAGAGCAATGGCAAAAGCCCAAGAGGAAATTAGAAATGTGTGTGGCAAGAAGGAGTTCATAGAGGAAGAGGATGTTGCAAAGCTTATGTATCTGCAGGCAGTGATTAAAGAAACTCTAAGGTTTTATGCGCCAGCACCACTGATACCAAGAGAAGCCATTAGAAGTTTCACAGTAGAAGGATATGAAATAGAACCCAAGACAATAGTATATGTGAATAGTTGGGCCATTCAGAGAGACCCTGAAGTTTGGAAAGACCCAGAAGAGTTTCGGCCAGAGAGGTTCTTGAACAATGAGATAGATTTTAAGGGACAAGATTTTGAATTTATTCCGTTCGGTGCAGGGCGTAGAATTTGTCCTGGCGTGTCACTGGGAATGGCAACGGTGGAGCTCATAACTGCAAATCTTCTTAACTCATTCAACTGGGAAATGCCCCAAGGGATGAAACCTGAACACATAGACACAGAGGGGTTGCCAGGACTTGCGCGACACAAGAAGAACCATCTCGTACTTGTTGCCAACAAACCTATGTGA 1503 0.4478 MLSLLFLLLGFPVIVVILLKNHGAKKKPSGPHPPGPRGLPIIGNLHQLDSSNLNFQLWQFSEIYGPLFSLQIGFKQAIVVSSPKLAKVVLKDHDRDVCTRPPSHGPLKLTYNGQEMIFSPYNDYWREIRKILVVHFFSSKRISTFSNVRKSEVKQMVEIVSGHVRYSKVTNLSEVLMSITSGITCRIAFGRKYDGEGAERSRFHGMLNDSQAMLLSFFVSDYIPFLGWIDKLTGMLGRLEKTFKALDVFFQEVVDDHLDPNRVKQNEEDDDIVDVLLELKKQGRLAIDLTHDQIKAIILDILVAGTDTTAATSVWAMTGLMKNPRAMAKAQEEIRNVCGKKEFIEEEDVAKLMYLQAVIKETLRFYAPAPLIPREAIRSFTVEGYEIEPKTIVYVNSWAIQRDPEVWKDPEEFRPERFLNNEIDFKGQDFEFIPFGAGRRICPGVSLGMATVELITANLLNSFNWEMPQGMKPEHIDTEGLPGLARHKKNHLVLVANKPM 500
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst1g00125 500 PANTHER CYTOCHROME P450 71B11-RELATED 16 496 - -
Spst1g00125 500 SUPERFAMILY Cytochrome P450 33 490 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst1g00125 500 Gene3D Cytochrome P450 25 499 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst1g00125 500 PRINTS E-class P450 group I signature 356 374 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst1g00125 500 PRINTS E-class P450 group I signature 432 442 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst1g00125 500 PRINTS E-class P450 group I signature 313 339 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst1g00125 500 PRINTS E-class P450 group I signature 442 465 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst1g00125 500 PRINTS E-class P450 group I signature 293 310 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst1g00125 500 PRINTS E-class P450 group I signature 61 80 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst1g00125 500 PRINTS E-class P450 group I signature 179 197 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst1g00125 500 PRINTS E-class P450 group I signature 396 420 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst1g00125 500 Pfam Cytochrome P450 33 494 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst1g00125 500 CDD CYP71-like 64 492 - -
Spst1g00125 500 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 435 444 IPR017972 GO:0005506|GO:0016705
Spst1g00125 500 Coils Coil 327 347 - -
Spst1g00125 500 PRINTS P450 superfamily signature 357 368 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst1g00125 500 PRINTS P450 superfamily signature 433 442 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst1g00125 500 PRINTS P450 superfamily signature 304 321 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst1g00125 500 FunFam Cytochrome P450 83B1 18 495 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst1g00125 Spst-Chr1 1905352 1907410 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst1g00125 2 498 Cytochrome P450 AT4G31500 45.709 9.50e-160 461
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst1g00125 - - gmx:100806470 781.941