Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst1g00120 ATGGGGTCACCTGTTAATGGAGTGGGTTCTTTATCAGAGGTTCAGAATTCAGTTTCCTTGGTAGATCATGATCCTCCTTCAACATCAGGGATCCCCCGGTCTTCTCGGCCGCCGTTAAGCACATCTAGAAATCATGGGGCTTCTTCCAATCAGTATTATAACACAAATGGGAAATCTGAGTATGTGAGCCTCAACAAAGCTGTTGAAAGTTGTTTAGGAAAGAACATCTCCAAAATGGAAACAAAATTAAGCATCAAGCAACCGTTAGATGCTTCCAAGAATTGTGATTTTAGCGCCGTATTAGAATCTGACAATCACCAATTAGGTTCGTCAAAAGGCGTTGTTGATCGAACAAAGAGTCACTGTCAGTCAGAGATTACTTTTTGTCCAAGTCCTCAGAATAGTTTCTATACAGAAGCCAAGGAAAGTTTTGCCAACACTGGAGTCAGTGAATGTGTTAGTGTTGATAAGTCAGTTGAAAGTGGAGAAGTTACTAATTCCTGTGAATTTAACGAGAGCCGGAAGACCAGCATCTGTAGAGGCAGCACTGGAAGTGACGTTAGTGATGAGAGCAGCACTAGTAGTTTGAGCAGTGCTTTGTACAAGCCCCACAAGGCTAATGATATAAGATGGGAAGCAATTCAAGCTATACGAGCCCGTGATGGGGTGTTGGAAATGAGACATTTCAGGTTATTGAAGAAATTGGGATGTGGAGACATAGGAAGTGTATATCTAGCTGAATTAAGTGGCACCAGGACTTGTTTTGCAATGAAAGTAATGAACAAAACCGAGTTGGCTAGTCGCAAGAAGCTTGTTAGGTCTCAGACAGAGAGGGAGATACTGCAGTCTCTAGATCATCCATTTCTACCCACATTGTATACACACTTTGAGACAGAGACATTTTCCTGCTTGGTAATGGAGTTTTGCCCTGGTGGGGACTTGCATGCACTCAGGCAAAGGCAACCGGGGAAGTATTTTTCTGAGATTGCTGCCAGGTTTTATGTGGCAGAAGTTCTCCTTGCCTTGGAGTACTTGCACATGCTTGGGGTCATCTACAGAGACCTCAAGCCTGAGAATGTGTTGGTGAGAGAAGATGGTCATATAATGCTTTCAGATTTTGATCTCTCTCTAAGGTGTGCTGTCAGTCCAACTCTGGTGAAGTCATCAAACTCTACCTTGGAGACAAAAAGCTCAGGATACTGCATTCAGCCTGCCTGCATTGAGCCAACATGTGTAATTCAGCCAGACTGCATTCAACCATCATGTTTCACACCGTCATTTCTCTCAAAATCCAAGAAAGAAAAAAAGTTGAAACCAAAGAATGATGTGCAGAATCAGGTGACCCCTCTCCCCGAGCTTATTGCCGAGCCCACGAATGCACGATCAATGTCTTTCGTGGGGACACACGAGTACCTGGCACCTGAAATCATCAAAGGTGAAGGTCATGGCAGTGCTGTGGACTGGTGGACATTTGGGATATTCTTATATGAGCTCTTGTTTGGTAGAACACCGTTCAAAGGTTCAGCAAACCGCGCCACACTATTCAATGTTGTTGGCCAGCCCTTGAAATTTCCAGAAGCTCCTACTGTGAGCTTTGCTGCCAGGGACTTGATCAGGGGTTTACTTGTGAAAGAGCCTCAGAATCGCCTTGCTTATAGACGTGGAGCAACAGAAATAAAACAACATCCATTTTTTCATAATGTTAACTGGGCACTGATCCGATGTGCAAATCCTCCAGAGGTTCCAAGACAGGCCATGAAAGCACTTGCAGCTGAAAAAGTGCCTGGAGTGAAGCCTTCTGGTAACTATTTAGATATTGATTTCTTTTGA 1830 0.4393 MGSPVNGVGSLSEVQNSVSLVDHDPPSTSGIPRSSRPPLSTSRNHGASSNQYYNTNGKSEYVSLNKAVESCLGKNISKMETKLSIKQPLDASKNCDFSAVLESDNHQLGSSKGVVDRTKSHCQSEITFCPSPQNSFYTEAKESFANTGVSECVSVDKSVESGEVTNSCEFNESRKTSICRGSTGSDVSDESSTSSLSSALYKPHKANDIRWEAIQAIRARDGVLEMRHFRLLKKLGCGDIGSVYLAELSGTRTCFAMKVMNKTELASRKKLVRSQTEREILQSLDHPFLPTLYTHFETETFSCLVMEFCPGGDLHALRQRQPGKYFSEIAARFYVAEVLLALEYLHMLGVIYRDLKPENVLVREDGHIMLSDFDLSLRCAVSPTLVKSSNSTLETKSSGYCIQPACIEPTCVIQPDCIQPSCFTPSFLSKSKKEKKLKPKNDVQNQVTPLPELIAEPTNARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGRTPFKGSANRATLFNVVGQPLKFPEAPTVSFAARDLIRGLLVKEPQNRLAYRRGATEIKQHPFFHNVNWALIRCANPPEVPRQAMKALAAEKVPGVKPSGNYLDIDFF 609
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst1g00120 609 FunFam serine/threonine-protein kinase D6PK-like 313 380 - -
Spst1g00120 609 FunFam serine/threonine-protein kinase D6PK-like 460 583 - -
Spst1g00120 609 PANTHER FLIPPASE KINASE 1-RELATED 93 587 - -
Spst1g00120 609 SMART serkin_6 229 565 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst1g00120 609 CDD STKc_phototropin_like 227 585 - -
Spst1g00120 609 FunFam Serine/threonine-protein kinase D6PK-like 227 312 - -
Spst1g00120 609 ProSiteProfiles Protein kinase domain profile. 229 565 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst1g00120 609 ProSitePatterns Serine/Threonine protein kinases active-site signature. 350 362 IPR008271 GO:0004672|GO:0006468
Spst1g00120 609 Gene3D Transferase(Phosphotransferase) domain 1 459 583 - -
Spst1g00120 609 Gene3D Transferase(Phosphotransferase) domain 1 313 378 - -
Spst1g00120 609 Gene3D Phosphorylase Kinase; domain 1 227 312 - -
Spst1g00120 609 SUPERFAMILY Protein kinase-like (PK-like) 206 584 IPR011009 -
Spst1g00120 609 Pfam Protein kinase domain 462 565 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst1g00120 609 Pfam Protein kinase domain 230 383 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst1g00120 609 MobiDBLite consensus disorder prediction 1 55 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst1g00120 Spst-Chr1 1829440 1832287 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst1g00120 133 609 AGC Kinase Gene Family AT5G47750 70.482 0.0 698
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_RSK-2 Spst1g00120 Pkinase 5.6e-37 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst1g00120 K08286 - gmx:100802402 1106.66
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst1g00120 1 1829440 1832287 Spst1g00120 1 1829440 1832287 ECH