Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst1g00114 ATGAGAATTCTTGAGCAATGCAGAATTCCTCTCCCTCCCAACTCAGAGCCAACTATCTCTCTTCTCCCCCTAACCTTCTTTGACCTTCCTTGGCTTTTCTTCTCTCCAAGCCAGCCCTTATTTTTCTATGAGTTTCCTCACCCAACCTCTGATTTCCATGCCACAATAGTCCCAAAACTAAAGCAATCTCTCTCTGTCACACTCCAACATTACTATCCTTTTGCTGGTAAATTTTCTCCCTCTTCTGATCTCACCAAACCCCACCTCATTTGCACTGATAACATCTCAGTTGCATTCACAGTCACTGAATCAAATGGAGACTTTAATCACTTTTGTGACAATCACCCTAGAGATGTCAAAGACTTCCACTTTCTTGTACCCAAATTGGGCTCAAGCTTTTCACATGCAGGCAAAGAAGAGTTTCCTTTGATTGCTATTCAACTAACACTATTCCCAAATGTTGGTATTTGCATTGGCCTTGCTTTTCACCATGTTGTTGCAGATGGGAGGACCTTCCACAATTTCCTCAACACATGGGCCACGTATTGTCGCGGCTTTGCAGCTTCAGCATTTTCACTGAAGCCACTCCCATCTTATGATCGAAGTGTGATTGTCGATGCAAAGGGTCTTGAAGAGGTTTTCATGAAAGAATGGAGAAAAAGAAGACTAGTGCAGGACATTGCCATAGGTAGACAACCCAGATCCGTAGATCTCTCAGGTATGGTTAGAGCCACATTCTTGATGAGTGCCACTGAAATGGAGAAAATTAAGCGCTTCATTATCAATTTTTGCAAAGAAAAGAATCAGCCTCAACCTGTTCATTTATCACCTTATGTTTTGAGCTGTGCATTTATATGGGTTTGTTTGCTCAAAATTCAACAATTTGTGAATGAGAAAGTGAACAAGAATAACCTTGAAGACCCCACATACTTTGGCTTCATAGCTGGTGGCATAACTAGATTAGACTATCCAGTGCCAAAGACATATTTGGGTAATTGTGTTGGCTTTGGAAGGGCATCAGTGAGAAGAAAAGAGTTACTTGGAGAAGATGGGATTGTTGTTGCAGCAAGAGCAATTGGAAGCACAGTTAAGAAGCTTGATGCATCACTTATTGCTGGGGCTGAAAAATGGATTTTGGATTGGGAGGAGTTGTATGAGTCAGAGCAGCATGTGCATGCTACCTGGTCTCCAAAACTGAAGCTTTATGAATTAGATTTTGGATGGGGAAGGCCCAAGAAAATAGAGGAGATTGCAATTGATTATACAAGAGCTTTTTCACTTGTACAGAGCAGAGGTCTTGAGGGTGGATTCGAGATAGGTTTGGCTTTAACTAAGCGCAAGATGGATACTTTCTCCATGTTCTTCACTGAAGGACTTAGTGCCCTTCCATGA 1392 0.4188 MRILEQCRIPLPPNSEPTISLLPLTFFDLPWLFFSPSQPLFFYEFPHPTSDFHATIVPKLKQSLSVTLQHYYPFAGKFSPSSDLTKPHLICTDNISVAFTVTESNGDFNHFCDNHPRDVKDFHFLVPKLGSSFSHAGKEEFPLIAIQLTLFPNVGICIGLAFHHVVADGRTFHNFLNTWATYCRGFAASAFSLKPLPSYDRSVIVDAKGLEEVFMKEWRKRRLVQDIAIGRQPRSVDLSGMVRATFLMSATEMEKIKRFIINFCKEKNQPQPVHLSPYVLSCAFIWVCLLKIQQFVNEKVNKNNLEDPTYFGFIAGGITRLDYPVPKTYLGNCVGFGRASVRRKELLGEDGIVVAARAIGSTVKKLDASLIAGAEKWILDWEELYESEQHVHATWSPKLKLYELDFGWGRPKKIEEIAIDYTRAFSLVQSRGLEGGFEIGLALTKRKMDTFSMFFTEGLSALP 463
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst1g00114 463 PANTHER - 2 461 - -
Spst1g00114 463 Gene3D - 239 462 IPR023213 -
Spst1g00114 463 Pfam Transferase family 19 452 - -
Spst1g00114 463 Gene3D - 1 229 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst1g00114 Spst-Chr1 1769032 1770423 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst1g00114 33 457 Monolignol Biosynthesis Gene Families AT5G48930 23.557 2.89e-21 94.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst1g00114 - - gmx:100817166 738.028