Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst1g00104 ATGACGGAGAGATATTGTTACAGGGAAGTGCTTCCGTTCACTGCAATGGTCGCCATAGAGTGCACCAACGTTGGTGTGAACGTTCTATTTAAAGCAGCAACCGTGAAGGGAATGGGTTATTATGCCTTCGTCGCTTATTCATTTGCAATCTCCACTCTCTTTCTCCTCTTGCCTCTGCCTTTCGTCTTTCGACGGTCAAGAGAGCTTCCACCGCTCAATCTCTCTCTCATCTTCAGAATTTTTTCACTCGGAGTGATTGGATTGACAGCTCAGCTTTGTGGATACAAGGGATTGAATTACACTTCGCCTACTCTGGCTTCTTCTCTCAGCAACCTCATACCCGCTTTCACCTTCATATTGGCTATCATTTTCAGGATGGAAAAAGTAGCTTTGAGAAGCTCAAGCACTCAGGCCAAAATCCTGGGTTCGTTCGTGTCTGTAGCAGGTGCACTCGTAGTTTTACTGTATAAGGGTCCCAAAATCTTTTCAACTCCATCTCCTACTGTTCATTCTCCAATGCTATCTTCATCACAAACAAATTGGGTTCTTGGTGGATCCCTACTTGCTGTTGAGTATTTTTTGGTTCCAATCTGGTACATTGTTCAGACCAGTATTATGAAAGAATACCCCGCAGAGTTTATTGTGGTCTTTCTGTACAACCTGAGTGGGACTCTCTTGTCTGCACCAATTTGCTTTCTATTAGAGGGAAATCTGAGAGCTTGGAAGCTAAATCCTGATGTAACATTGATCTCTGTCATATATTCGGGTTTCTTTTGCACGGGGCTAAGTAGTTTGGTTCACACTTGGGGCCTCCATCTTAAAGGACCAGTTTATATATCAATCTTTAAGCCTTTATCCATTGTTGTTGCTGCTGTTTGCAGTGTTCTTTTCCTTGGTGAAGCACTGTATTTTGGAACTGTTCTTGGAGCAGTGATACTCTCATTTGGGTTTTATGCTGTGATATGGGGTAAAGCAAAAGAAGAGGATTTGTGTGAGGACTTTGACATGCGTCCTCCATCAAGTAGTAAGAGTCCTTTGTTGCTCAGCCACAAAGGGAAAGATAAAGAAGAGGGCAACCTTTGTTGA 1086 0.4309 MTERYCYREVLPFTAMVAIECTNVGVNVLFKAATVKGMGYYAFVAYSFAISTLFLLLPLPFVFRRSRELPPLNLSLIFRIFSLGVIGLTAQLCGYKGLNYTSPTLASSLSNLIPAFTFILAIIFRMEKVALRSSSTQAKILGSFVSVAGALVVLLYKGPKIFSTPSPTVHSPMLSSSQTNWVLGGSLLAVEYFLVPIWYIVQTSIMKEYPAEFIVVFLYNLSGTLLSAPICFLLEGNLRAWKLNPDVTLISVIYSGFFCTGLSSLVHTWGLHLKGPVYISIFKPLSIVVAAVCSVLFLGEALYFGTVLGAVILSFGFYAVIWGKAKEEDLCEDFDMRPPSSSKSPLLLSHKGKDKEEGNLC 361
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst1g00104 361 Pfam EamA-like transporter family 196 321 IPR000620 GO:0016020
Spst1g00104 361 Pfam EamA-like transporter family 24 154 IPR000620 GO:0016020
Spst1g00104 361 MobiDBLite consensus disorder prediction 336 361 - -
Spst1g00104 361 SUPERFAMILY Multidrug resistance efflux transporter EmrE 47 157 - -
Spst1g00104 361 PANTHER WAT1-RELATED PROTEIN 11 336 IPR030184 GO:0016020|GO:0022857
Spst1g00104 361 SUPERFAMILY Multidrug resistance efflux transporter EmrE 231 326 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst1g00104 Spst-Chr1 1632502 1638237 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst1g00104 4 354 Nodulin-like Gene Family AT5G40240 53.352 9.37e-137 392
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst1g00104 - - gmx:100805667 560.451
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst1g00104 1 1632502 1638237 Spst1g00104 1 1632502 1638237 ECH
Spst2g01445 2 13245869 13249722 Spst1g00104 1 1632502 1638237 ECH
Spst9g01277 9 12223813 12229086 Spst1g00104 1 1632502 1638237 ECH