Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst1g00094 ATGGATCTGGAGTCTGTGATCTATAAAAACTCAATTAAGGATGGATCATGGAAGACAGTGTTAACATTGGCTTACCAGAGCTTGGGTGTTGTGTATGGCGATTTAAGCACATCACCACTTTATGTTTACAAAAGCACTTTTGCTGAGGACATTCAGCATTCAGAGACCAATGAAGAGATATATGGGGTGTTATCTTTTGTCTTCTGGACTCTCACACTGGTTCCACTTCTCAAGTATGTCTTCATTGTGCTCAGAGCAGATGACAATGGAGAAGGAGGGACTTTTGCTCTGTACTCTCTGCTATGCAGGCATGCTCAGGTGGGGTTGTTGCCGAATGTTCAGCTTGCAGATGAGGAGCTAACTGAGTACACCAAGGATGGAACAGTGCCAATTGATAAGAAGAAAGTTGGGTTGGGGTTGAAATCGGTGTTGGAGAAACACAAGGTGCTGCAGAGGGTGCTGCTTGTTCTGGCTTTAATAGGGGCTTGCATGGTTATTGGGGATGGTGTGCTTACACCTGCTATTTCTGGTACTGGGATTTGCATTCTTATCTGCGTTTTGGTCATGACCAAGGTTTTAAACTGCGGTCCTGGTTTCTTCGCAATCTTTCATATTGCGGGAAATTGTGGACAATGCAACCCGCAATCGGTTTTCTCTGCCGTGTCAGGTTTGGAGCTTTCTATGTCTAAAGAACAGCATAGATATGTTGAAGTCCCTGTTGCTTGTGTGATACTGATATTTTTGTTTGCGCTTCAACATTATGGAACACATCGCTTGGGGTTTCTATTTGCTCCTGTTGTGATGACCTGGCTCCTATGCATCAGTTGTATCGGAATGTATAATATCTTACATTGGAACCCTCATGTCTATGAGGCTCTCTCTCCATACTACATGTTCAAATTTCTGAAGAAGACTCAAAGGGGAGGTTGGATGTCCTTAGGGGGCATTCTACTGTGTATAACAGGTTCTGAAGCTATGTTTGCTGATCTAGGACACTTTTCCCAGTTGTCAATTAAGATTGCTTTTACCTTTTTGGTGTACCCTTCTCTAATCCTGGCATATATGGGACAAGCTGCATATCTATCCAAGCACCATATTATTGAAAGTGATTACCGAATTGGGTTCTACGTATCTGTACCTGAGAAAATTAGATGGCCTGTTCTTGCAATAGCCATACTTCAAGCCGTGGTTGGAAGTCAAGCTATCATCACAGGTACTTTCTCAATAATCAAACAATGTTCTGCCATGGGATGCTTCCCCAAAGTCAAGATCATTCATACATCATCAAAGGTACACGGCCAGATTTATATCCCAGAGATCAACTGGTGTTTGATGCTACTTTGCCTGGCTATTACTGTTGGATTCAGAGATACAAAACGCATGGGAAATGCAGCAGGTTTGGCTGTCATAACTGTCATGCTGGTCACCACTTGCTTAATGTCTCTAGTTATAGTGTTATGCTGGCATAAGAGTGTTTTCCTAGCCATTTGCTTCATATTCTTCTTTGGGTCCATTGAAGCACTATACTTCTCTGCATCCCTGATCAAGTTCCTTGAAGGGGCTTGGGTGCCCATTGCCCTCTCGCTCATATTTCTTATTGTCATGTATGTGTGGCACTATGGCACACTTAAAAAGTATGAGTTTGATGTTCAAAATAAGGTGTCCATCAACTGGCTCCTTGGTTTAGGCCCCACTCTAGGAATTGTGCGGGTCAGGGGAATTGGCCTAATACACACTGAGCTTGTGTCTGGGATCCCAGCTATTTTCTCTCACTTTGTTACCAATCTCCCAGCTTTTCATCAGGTTGTGATCTTCCTTTGTGTCAAATCTGTCCCGGTGCCACATGTCAGACCTGGGGAAAGGTTCTTAGTTGGTAGAGTTGGCCCAAAGGAATATAGGTTGTATAGGTGCATAGCGCGGTATGGCTATCGTGATTTTCACAAGGATGACATTGAGTTTGAGAAAGATCTTATTTGTAGCGTAGCAGAATTCATACGGTCGGAGACCTCTGAATCCGGCATAGGATTTGAGAGTTTTGAAGATGACAGAAAGATGACAGTTGTTGGCACCTCAGCATCAAACTCAGAAGGTATAAGGATGTGTGAAGATGATCAAGACAACAATAATTTTCAAGTAGAAGACACCTTAGAATTGAGGGTGGTTAAGTCTCCTGAAATAGTGAGGAAGCGAGTGAGGTTTGTTGTGCCAGACAGTCCACGGATTGATTTGGGTGCAAGGGAGGAGTTGCAGGAACTAATGCAAGCAAGGGAGGGAGGAATGGCATTCATAATGGGTCACTCATATGTGAAAGCAAAGAGAGGATCAAGCTGGATAAAGAAAGTTGTGATCAATTATGGATATGATTTCTTGAGGAGAAACTCTAGAGGACCAACTTATGCTCTAAGTATCCCTCATGCATCCATCCTTGAAGTTGGCATGGTCTATCATGTCTGA 2454 0.4319 MDLESVIYKNSIKDGSWKTVLTLAYQSLGVVYGDLSTSPLYVYKSTFAEDIQHSETNEEIYGVLSFVFWTLTLVPLLKYVFIVLRADDNGEGGTFALYSLLCRHAQVGLLPNVQLADEELTEYTKDGTVPIDKKKVGLGLKSVLEKHKVLQRVLLVLALIGACMVIGDGVLTPAISGTGICILICVLVMTKVLNCGPGFFAIFHIAGNCGQCNPQSVFSAVSGLELSMSKEQHRYVEVPVACVILIFLFALQHYGTHRLGFLFAPVVMTWLLCISCIGMYNILHWNPHVYEALSPYYMFKFLKKTQRGGWMSLGGILLCITGSEAMFADLGHFSQLSIKIAFTFLVYPSLILAYMGQAAYLSKHHIIESDYRIGFYVSVPEKIRWPVLAIAILQAVVGSQAIITGTFSIIKQCSAMGCFPKVKIIHTSSKVHGQIYIPEINWCLMLLCLAITVGFRDTKRMGNAAGLAVITVMLVTTCLMSLVIVLCWHKSVFLAICFIFFFGSIEALYFSASLIKFLEGAWVPIALSLIFLIVMYVWHYGTLKKYEFDVQNKVSINWLLGLGPTLGIVRVRGIGLIHTELVSGIPAIFSHFVTNLPAFHQVVIFLCVKSVPVPHVRPGERFLVGRVGPKEYRLYRCIARYGYRDFHKDDIEFEKDLICSVAEFIRSETSESGIGFESFEDDRKMTVVGTSASNSEGIRMCEDDQDNNNFQVEDTLELRVVKSPEIVRKRVRFVVPDSPRIDLGAREELQELMQAREGGMAFIMGHSYVKAKRGSSWIKKVVINYGYDFLRRNSRGPTYALSIPHASILEVGMVYHV 817
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst1g00094 817 Pfam K+ potassium transporter 215 645 IPR003855 GO:0015079|GO:0016020|GO:0071805
Spst1g00094 817 Pfam K+ potassium transporter 25 176 IPR003855 GO:0015079|GO:0016020|GO:0071805
Spst1g00094 817 PANTHER OSMOTIC STRESS POTASSIUM TRANSPORTER 15 816 IPR003855 GO:0015079|GO:0016020|GO:0071805
Spst1g00094 817 NCBIfam potassium uptake protein 214 817 IPR003855 GO:0015079|GO:0016020|GO:0071805
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst1g00094 Spst-Chr1 1528314 1534042 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst1g00094 1 815 Inorganic Solute Cotransporters AT5G14880 72.914 0.0 1206
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst1g00094 K03549 - qsa:O6P43_004598 1367.83
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst1g00094 1 1528314 1534042 Spst1g00094 1 1528314 1534042 ECH