Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst1g00078 ATGGTTGGGGAGGATTCTAAATCTGGTATATTATCAGGCAAAGAGGCTCGCATAGCTCAGTCCACAAATCACAAGATTAATAGAATGGCATCGCGAGGGTATTTCTCTGTTTTTCTCCATGCTTTTGTGTTAGCAAATGTCGCAACTTTAGGATTCTCTCAGTTGTCACCTAATTACTATGATTACTCGTGCCCCAATGCCTTGAGTACCATCAAAAGTGTGGTAGAGGCTGCAGTGCAGAAAGAGAACCGTATGGGCGCTTCATTGCTACGCTTGCACTTCCATGATTGTTTTGTGAACGGTTGTGATGGTTCAATTCTACTGGACTCTTCACCCAGCATAGACAGTGAAAAGAATGCACGGCAAAATAATCAGTCTGCTAGAGGATTTGAGGTGGTGGATGAGATCAAGCAAGCCGTGGATGCAGCATGTGGAAAACCAGTTGTTTCTTGTGCAGACATATTAGCTGTTGTCGCTCGTGATTCTGTTGTTGCGTTAGGGGGGCCAACCTGGGAAGTAAAACTGGGGAGAAGAGATTCAACCACAGCAAGTCGTGCAGCAGCTGAAGCTAACATTCCACTGCCAACTCTTAGTCTTTCTGAACTCATCACCTCATTCAGGATCCATGGTCTTGATGAGAAGGATCTTGTTGTTCTTTCTGGAGGTCACGCCCTTGGATTTGCACATTGTGCTACCTTTAGGGGCCATATCTACAACGACTTCAACATCGATCCCAACTTCGCACAATATCTCCAATCCATTTGCCCTCGAAATGGTGGTGACGAAAACCTTGCTCCCTTGGACTCAACAGCCACGAACTTTGACGTATCCTATTACTCTAATTTGGTTCAAAAGAAAGGGCTTCTACACTCCGATCAAGAACTCTTCAATGGTGGTTCTACTGATGGACTTGTCGAACAATACAGCTACAATACCCAAGCTTTCTTCGCAGACTTCGGGGATTCCATGATTAAGTTGGGAAATATTCAGCCCCTTACTGGCGATCAAGGTGAAGTTCGTGTTAATTGCAGGAACGTGAATTATTATTGA 1050 0.4467 MVGEDSKSGILSGKEARIAQSTNHKINRMASRGYFSVFLHAFVLANVATLGFSQLSPNYYDYSCPNALSTIKSVVEAAVQKENRMGASLLRLHFHDCFVNGCDGSILLDSSPSIDSEKNARQNNQSARGFEVVDEIKQAVDAACGKPVVSCADILAVVARDSVVALGGPTWEVKLGRRDSTTASRAAAEANIPLPTLSLSELITSFRIHGLDEKDLVVLSGGHALGFAHCATFRGHIYNDFNIDPNFAQYLQSICPRNGGDENLAPLDSTATNFDVSYYSNLVQKKGLLHSDQELFNGGSTDGLVEQYSYNTQAFFADFGDSMIKLGNIQPLTGDQGEVRVNCRNVNYY 349
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst1g00078 349 ProSitePatterns Peroxidases active site signature. 86 97 IPR019794 GO:0004601
Spst1g00078 349 Gene3D - 58 344 - -
Spst1g00078 349 SUPERFAMILY Heme-dependent peroxidases 54 347 IPR010255 GO:0004601|GO:0006979|GO:0020037
Spst1g00078 349 FunFam Peroxidase 193 326 - -
Spst1g00078 349 Pfam Peroxidase 72 309 IPR002016 GO:0004601|GO:0006979|GO:0020037
Spst1g00078 349 Gene3D Peroxidase, domain 2 193 326 - -
Spst1g00078 349 PANTHER PEROXIDASE 72-RELATED 53 346 IPR000823 GO:0004601|GO:0006979|GO:0020037
Spst1g00078 349 PRINTS Haem peroxidase superfamily signature 86 100 IPR002016 GO:0004601|GO:0006979|GO:0020037
Spst1g00078 349 PRINTS Haem peroxidase superfamily signature 149 166 IPR002016 GO:0004601|GO:0006979|GO:0020037
Spst1g00078 349 PRINTS Haem peroxidase superfamily signature 167 179 IPR002016 GO:0004601|GO:0006979|GO:0020037
Spst1g00078 349 PRINTS Haem peroxidase superfamily signature 215 230 IPR002016 GO:0004601|GO:0006979|GO:0020037
Spst1g00078 349 PRINTS Haem peroxidase superfamily signature 267 282 IPR002016 GO:0004601|GO:0006979|GO:0020037
Spst1g00078 349 FunFam Peroxidase 58 202 - -
Spst1g00078 349 ProSitePatterns Peroxidases proximal heme-ligand signature. 215 225 IPR019793 -
Spst1g00078 349 PRINTS Plant peroxidase signature 88 108 IPR000823 GO:0004601|GO:0006979|GO:0020037
Spst1g00078 349 PRINTS Plant peroxidase signature 214 226 IPR000823 GO:0004601|GO:0006979|GO:0020037
Spst1g00078 349 PRINTS Plant peroxidase signature 265 280 IPR000823 GO:0004601|GO:0006979|GO:0020037
Spst1g00078 349 PRINTS Plant peroxidase signature 64 83 IPR000823 GO:0004601|GO:0006979|GO:0020037
Spst1g00078 349 PRINTS Plant peroxidase signature 128 141 IPR000823 GO:0004601|GO:0006979|GO:0020037
Spst1g00078 349 PRINTS Plant peroxidase signature 148 158 IPR000823 GO:0004601|GO:0006979|GO:0020037
Spst1g00078 349 PRINTS Plant peroxidase signature 167 182 IPR000823 GO:0004601|GO:0006979|GO:0020037
Spst1g00078 349 PRINTS Plant peroxidase signature 281 298 IPR000823 GO:0004601|GO:0006979|GO:0020037
Spst1g00078 349 PRINTS Plant peroxidase signature 321 334 IPR000823 GO:0004601|GO:0006979|GO:0020037
Spst1g00078 349 ProSiteProfiles Plant heme peroxidase family profile. 54 347 IPR002016 GO:0004601|GO:0006979|GO:0020037
Spst1g00078 349 CDD secretory_peroxidase 54 344 IPR033905 GO:0004601|GO:0042744
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst1g00078 Spst-Chr1 1310592 1313024 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst1g00078 53 347 Peroxidase AT5G05340 59.060 3.87e-124 358
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst1g00078 K00430 - gmx:100802035 523.472