LGRPv2

Gene search

Sequence information

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Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Spst1g00078	ATGGTTGGGGAGGATTCTAAATCTGGTATATTATCAGGCAAAGAGGCTCGCATAGCTCAGTCCACAAATCACAAGATTAATAGAATGGCATCGCGAGGGTATTTCTCTGTTTTTCTCCATGCTTTTGTGTTAGCAAATGTCGCAACTTTAGGATTCTCTCAGTTGTCACCTAATTACTATGATTACTCGTGCCCCAATGCCTTGAGTACCATCAAAAGTGTGGTAGAGGCTGCAGTGCAGAAAGAGAACCGTATGGGCGCTTCATTGCTACGCTTGCACTTCCATGATTGTTTTGTGAACGGTTGTGATGGTTCAATTCTACTGGACTCTTCACCCAGCATAGACAGTGAAAAGAATGCACGGCAAAATAATCAGTCTGCTAGAGGATTTGAGGTGGTGGATGAGATCAAGCAAGCCGTGGATGCAGCATGTGGAAAACCAGTTGTTTCTTGTGCAGACATATTAGCTGTTGTCGCTCGTGATTCTGTTGTTGCGTTAGGGGGGCCAACCTGGGAAGTAAAACTGGGGAGAAGAGATTCAACCACAGCAAGTCGTGCAGCAGCTGAAGCTAACATTCCACTGCCAACTCTTAGTCTTTCTGAACTCATCACCTCATTCAGGATCCATGGTCTTGATGAGAAGGATCTTGTTGTTCTTTCTGGAGGTCACGCCCTTGGATTTGCACATTGTGCTACCTTTAGGGGCCATATCTACAACGACTTCAACATCGATCCCAACTTCGCACAATATCTCCAATCCATTTGCCCTCGAAATGGTGGTGACGAAAACCTTGCTCCCTTGGACTCAACAGCCACGAACTTTGACGTATCCTATTACTCTAATTTGGTTCAAAAGAAAGGGCTTCTACACTCCGATCAAGAACTCTTCAATGGTGGTTCTACTGATGGACTTGTCGAACAATACAGCTACAATACCCAAGCTTTCTTCGCAGACTTCGGGGATTCCATGATTAAGTTGGGAAATATTCAGCCCCTTACTGGCGATCAAGGTGAAGTTCGTGTTAATTGCAGGAACGTGAATTATTATTGA	1050	0.4467	MVGEDSKSGILSGKEARIAQSTNHKINRMASRGYFSVFLHAFVLANVATLGFSQLSPNYYDYSCPNALSTIKSVVEAAVQKENRMGASLLRLHFHDCFVNGCDGSILLDSSPSIDSEKNARQNNQSARGFEVVDEIKQAVDAACGKPVVSCADILAVVARDSVVALGGPTWEVKLGRRDSTTASRAAAEANIPLPTLSLSELITSFRIHGLDEKDLVVLSGGHALGFAHCATFRGHIYNDFNIDPNFAQYLQSICPRNGGDENLAPLDSTATNFDVSYYSNLVQKKGLLHSDQELFNGGSTDGLVEQYSYNTQAFFADFGDSMIKLGNIQPLTGDQGEVRVNCRNVNYY	349

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Annotation information

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Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Spst1g00078	349	ProSitePatterns	Peroxidases active site signature.	86	97	IPR019794	GO:0004601
	Spst1g00078	349	Gene3D	-	58	344	-	-
	Spst1g00078	349	SUPERFAMILY	Heme-dependent peroxidases	54	347	IPR010255	GO:0004601\|GO:0006979\|GO:0020037
	Spst1g00078	349	FunFam	Peroxidase	193	326	-	-
	Spst1g00078	349	Pfam	Peroxidase	72	309	IPR002016	GO:0004601\|GO:0006979\|GO:0020037
	Spst1g00078	349	Gene3D	Peroxidase, domain 2	193	326	-	-
	Spst1g00078	349	PANTHER	PEROXIDASE 72-RELATED	53	346	IPR000823	GO:0004601\|GO:0006979\|GO:0020037
	Spst1g00078	349	PRINTS	Haem peroxidase superfamily signature	86	100	IPR002016	GO:0004601\|GO:0006979\|GO:0020037
	Spst1g00078	349	PRINTS	Haem peroxidase superfamily signature	149	166	IPR002016	GO:0004601\|GO:0006979\|GO:0020037
	Spst1g00078	349	PRINTS	Haem peroxidase superfamily signature	167	179	IPR002016	GO:0004601\|GO:0006979\|GO:0020037

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Duplication type information

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Select	Gene	Chromosome	Start	End	Duplicated_type
	Spst1g00078	Spst-Chr1	1310592	1313024	Transposed

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Functional genes information

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Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Spst1g00078	53	347	Peroxidase	AT5G05340	59.060	3.87e-124	358

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Pathway information

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Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Spst1g00078	K00430		-	gmx:100802035	523.472

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