Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Spst1g00056 | ATGTATGGTGGTTGCATACCAAATTTTCAAGTCATTTGTCAAGGAGGTGGTCACATGGGTTCACAAGATGATTACATAATGAAAGAGTTGCAAAATACTGATTGGCCAAAATCTGAATATGAAACAACAAGTCCTATTACTCTAGAAGAATGTACAAAATCTTGTTTGCAAGATTGCTTATGTGTGTTGGTTACTTTCAGTGGAAATTCTTGTTGGAAGAAGAAGCTACCGCTCACAAATGGGAGAAGAGATAAAGGAGTAAATGGAACTTCTATTATAAAACTGATGAAAAATAATGAATTCTTGATCTCTTTCCCAAACCAAAAGGATCATGAGACCTTGGTCATTATTATATCAGTTCTTTTAGGCTTCTCTGTGTTGGTCATTTTAATGTTGGTTGGTGCAATATATTTTGGTTTCTCCTACAACCGTAAGAAGATCAAAAGTAGTAGAACCAAAAATCATGTTGTTGATAATATCTTGCGTAACTTCACCTTCGAGGAACTTGTAGAAGCAACAAGAAACTTTAGTGATGAATTGGGAAGGGGATCTTTTAGCATTGTCTACAAAGGAACAACAAAGATGACTAGTGTGGCTGTTAAGAAATTAGACAAGTTGTTTCAAGACAATGACAAGGAATTTCAGACAGAAGTGAATGTAATAGGTCAAACTCATCATAGGAATTTAGTTCGTCTACTTGGATATTGTAATGAAGGACAACACCGAATTTTGGTATATGAGTTTATGAGCAATGGCACTTTAGCTAGCTTCCTTTTCACCCCTTTGAAATCAAATTGGAGACAACGAGTTGACATTGCTAATGGGATTGCGAGAGGTCTTGTTTACTTGCATGAGGAATGTTGCACCCAAATCATCCACTGTGACATAAAGCCACAAAATATCCTTCTAGATGATCTATGTAATGCCAGAATTTCTGATTTCGGATTAGCAAAGCTGTTACTGATCAACCAAAGCCACACTGAAACTGGAATTAGGGGAACGAAGGGGTATGTTGCACCAGATTGGTTTAGAAGTTCACCAATCACTACTAAGGTTGACACTTATAGTTTTGGTGTGGTGCTATTAGAGATAATTTGTTGTAGGAGGAATGTAGAAAAGGAACTTGTTGATGAAGAAAAAGGGATATTGACGGATTGGGCATATGATTGCTACAAGACTAGAAGATTAGACATTCTTCTAGAAAATGATGATGAAGCTATTAATAACATTAAGACTTTTGAAAAATTTGTAATGATAGCTATTTGGTGCATTCATGAAGATCCCTCTCTTAGGCCAACAATGAAGAAGGTTTTGCTAATGCTGGAAGGAATAGTTGAAGTTTCAATACCCCCAAATCCCTACCTTTATGGTTCTACTGGTTAA | 1383 | 0.3623 | MYGGCIPNFQVICQGGGHMGSQDDYIMKELQNTDWPKSEYETTSPITLEECTKSCLQDCLCVLVTFSGNSCWKKKLPLTNGRRDKGVNGTSIIKLMKNNEFLISFPNQKDHETLVIIISVLLGFSVLVILMLVGAIYFGFSYNRKKIKSSRTKNHVVDNILRNFTFEELVEATRNFSDELGRGSFSIVYKGTTKMTSVAVKKLDKLFQDNDKEFQTEVNVIGQTHHRNLVRLLGYCNEGQHRILVYEFMSNGTLASFLFTPLKSNWRQRVDIANGIARGLVYLHEECCTQIIHCDIKPQNILLDDLCNARISDFGLAKLLLINQSHTETGIRGTKGYVAPDWFRSSPITTKVDTYSFGVVLLEIICCRRNVEKELVDEEKGILTDWAYDCYKTRRLDILLENDDEAINNIKTFEKFVMIAIWCIHEDPSLRPTMKKVLLMLEGIVEVSIPPNPYLYGSTG | 460 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Spst1g00056 | 460 | CDD | PAN_AP_plant | 9 | 95 | - | - | |
Spst1g00056 | 460 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 291 | 303 | IPR008271 | GO:0004672|GO:0006468 | |
Spst1g00056 | 460 | SUPERFAMILY | Protein kinase-like (PK-like) | 157 | 442 | IPR011009 | - | |
Spst1g00056 | 460 | CDD | STKc_IRAK | 180 | 444 | - | - | |
Spst1g00056 | 460 | PANTHER | G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD2-5 | 2 | 452 | - | - | |
Spst1g00056 | 460 | FunFam | G-type lectin S-receptor-like serine/threonine-protein kinase | 249 | 449 | - | - | |
Spst1g00056 | 460 | ProSitePatterns | Protein kinases ATP-binding region signature. | 180 | 202 | IPR017441 | GO:0005524 | |
Spst1g00056 | 460 | Gene3D | Transferase(Phosphotransferase) domain 1 | 249 | 449 | - | - | |
Spst1g00056 | 460 | FunFam | S-receptor-like serine/threonine-protein kinase | 143 | 248 | - | - | |
Spst1g00056 | 460 | SMART | serkin_6 | 174 | 441 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Spst1g00056 | 460 | Pfam | Protein kinase domain | 177 | 438 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Spst1g00056 | 460 | ProSiteProfiles | Protein kinase domain profile. | 174 | 455 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Spst1g00056 | 460 | Gene3D | Phosphorylase Kinase; domain 1 | 137 | 248 | - | - | |
Spst1g00056 | 460 | Pfam | PAN-like domain | 26 | 72 | IPR003609 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Spst1g00056 | Spst-Chr1 | 792916 | 794298 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Spst1g00056 | 107 | 446 | Receptor kinase-like Gene Family | AT5G45780 | 37.536 | 2.55e-69 | 229 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | RLK-Pelle_SD-2b | Spst1g00056 | Pkinase | 1.4e-48 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Spst1g00056 | - | - | gmx:100796619 | 796.193 |