Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst1g00028 ATGATGCTCAAGATCACCAAGCGATTTCGTTTCTCCAATTTTGATAAGTATAGAAAGGGGAATGGAAAGAAGTTCTCCAAGGCGTTCAAGGACATGGTGGCTTCTTGTCTAGACCAAGATCCTTCCAAAAGACCCACAGCTGATAAGTTGCTGAAACACCCCTTCTTTAAAAACTGTAAGGGAACTGATTTTCTGGTGAGGAACGTTCTCCAAGGGTTGCCCAGTGTGGAGAAAAGGTATAAGGATAACAAGGTTAATGAGCATGCAGATGAGGGGGAGCATGATGATGATGATGATGAAGAAGACCCTGCCATGCTGGTGAAGGAGAGAAGGATCAGCGGGTGGAACTTCAACCAAGACGGGTTGGAGCTTGATCCTGTGTTCCCAAACGATGATGCGGTGGCAAAAGAGGTTGCGTTTGGAAGGGAAGCGGCGGGTGGTGGTGGCGTGAAGAAGGAAAAGATGTTGGCGACTCTGAATGTGTTGAAAGGGAGCTTGGAACAAGAGCCGTTGGAAGTGAAGTTTCCGGTGAAAACGATACAAGGAGAAGAAGAGAGTGATCATCAAGTAGCTGCTGCCGCTGATCATGGTGAAGAGCACAAGGAGATTTCTAGGCTGAGGGTCGCACTTGGAAAATGA 639 0.4742 MMLKITKRFRFSNFDKYRKGNGKKFSKAFKDMVASCLDQDPSKRPTADKLLKHPFFKNCKGTDFLVRNVLQGLPSVEKRYKDNKVNEHADEGEHDDDDDEEDPAMLVKERRISGWNFNQDGLELDPVFPNDDAVAKEVAFGREAAGGGGVKKEKMLATLNVLKGSLEQEPLEVKFPVKTIQGEEESDHQVAAAADHGEEHKEISRLRVALGK 212
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst1g00028 212 Gene3D Transferase(Phosphotransferase) domain 1 1 94 - -
Spst1g00028 212 PANTHER SERINE/THREONINE-PROTEIN KINASE FRAY2 21 133 IPR047173 GO:0043539
Spst1g00028 212 MobiDBLite consensus disorder prediction 81 102 - -
Spst1g00028 212 ProSiteProfiles Protein kinase domain profile. 1 56 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst1g00028 212 SUPERFAMILY Protein kinase-like (PK-like) 15 61 IPR011009 -
Spst1g00028 212 MobiDBLite consensus disorder prediction 184 205 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst1g00028 Spst-Chr1 428048 428748 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst1g00028 1 185 MAP Kinase Kinase Kinase Kinase AT4G14480 39.819 6.58e-40 140
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE20-Fray Spst1g00028 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst1g00028 K08835 - gmx:100820227 261.151