Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst1g00004 ATGTCCAAATTTCGCGGATTCAACCTCAGGAAGCGCCTCATCCGGGTCTCCAAATGGGTCTTCAGGAAGATCCGGTTCCGGGGCCGACCCGGATACCATCGCCTCGGCGACTATCACCGGTCGCCTATCGCCAAACTCCTCAAATGGGGTCGCAAGCTGAAGGCCGGCGCCAAGTCCTTCTTGACAGTGACGTCCGGGTCGGGTTACGCTCAATTAGGATCCGACCCTGATCCGAGTGTGCCCAAGGGACACCTCGCCGTGTACGTAGGGCAGAAGGATGGGGAGTTGCACCGAGTGCTGGTGCCGGTAATATACTTCAACCACCCTTTGTTTGGGGAATTGCTGAAGGAGGCTGAAGAGGAGTTCGGATTCCACCATGACGGGGGAATCACCATACCGTGCCGGTTCACCGAGTTTGAACAGGTCAAGACCCGAATCGCATCCGGATCTCGCCGGGGTGTCCGTTCAAAGAGGATGGACTGGTGA 486 0.5761 MSKFRGFNLRKRLIRVSKWVFRKIRFRGRPGYHRLGDYHRSPIAKLLKWGRKLKAGAKSFLTVTSGSGYAQLGSDPDPSVPKGHLAVYVGQKDGELHRVLVPVIYFNHPLFGELLKEAEEEFGFHHDGGITIPCRFTEFEQVKTRIASGSRRGVRSKRMDW 161
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst1g00004 161 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 59 141 IPR003676 GO:0009733
Spst1g00004 161 Pfam Auxin responsive protein 65 143 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst1g00004 Spst-Chr1 40559 41044 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst1g00004 55 139 Calmodulin-binding Proteins AT5G20810 45.977 4.68e-18 75.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst1g00004 K14488 - gmx:100783436 275.404