Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst11g01452 ATGCCGAGAAAAGGAATGAGAAGCATTTTCTTCAAGCCATCACCTTCTCCTTCAACCTCCACCTCATCACTACCACCTCCCTCTCCTCTCCGCACTTTTTCAGACTCCTTAATGGAAGAAAACATACAAACCGCACACTCCCTCATAATTAAATGGGACGATTCAAATGTCACAACAACGCTTTTCAGCGGCACGCGCCAGGAGGCCAAACAGTACCTTAACGCCGTCAAGGGACTTCAATCCGCTATGCAGTACCTCGTCGCACAGGATTCCTCCTCCGCCACTCTTGTGCGCGCTCAGTTCCTCATGCAACTCGCCATGAAGACCCTCCAGAAAGAGTTCTACCAGATTCTTTCCTCCAACAGAGACCACCTTGATCCCGAATCCGTCTCCACGCGCTCTTCCATCGATTTCCGCAGCAGTTTCTCTGATTACGTCTCCGATTATGACGACGAAATCACAGTCTCCGAGGACGACTTCCGCGTCTCCGAGACCGAGCGTGTTTCCATGCTCGCCATGGAGGATTTGAAAGCCATCGCGGATTGCATGATTGCCTCCGGCTACGGCAAAGAGTGCGTTAAGGTATATATCATCATGAGAAAATCCATCGTCGACGAAGCGCTGTACCATCTCGGAGTGGAAAAACTGAGCTTCCCTCAGGTTCAGAAAATGGACTGGGAGGTTATCGAATTGAAGATCAAGAGCTGGTTGAAAGCTATTAAAGTCGCCGTTGGAACTCTCTTCCACGGCGAGAGGATCCTCTGCGACCACGTCTTCGCCTCGAATTCCGGAAAGAGGATTGCGGAATCGTGTTTCGCTGAAATCACCAGAGACGGCGCCCTATCGCTGTTCGGATTCCCGGAAATGGTGGCGAAGTACAAGAAAACGCCGGAGAAAATGTTCAAGATCTTGGATTTGTACGAAGCGATCTCTGACCGCTGGACTCAAATCGAATCCATATTCTCCTTCGAATCGACCTCTGTCATTCGCTCGCAGGCCGTTACTTCAATGGTGAAACTCGGCGAAGCAGTTAGAACGATGCTGACGGACTTCGAGACCGCTATTCAGAAGGACTCCTCCAAGAAAACGGTCCCTGGCGGTGGGGTCCACCCTCTCACCCGTTACGTGATGAACTACCTCACGTTCCTCGCCGATTACAGCGGCGTGTTGGTTGATATTATCCCCGATTTGCCGCAATCGCCGTTGCCCGAGACTTATTACCGCAGCCCCATGCGAGAGGAGAACGCGCCGGTTTCGGAGTTATCCGAGCGAATCGCGTGGCTCATACTCGTCGTGCTCTGCAAGCTCGACGGCAAAGCGGAACACTACAAGGACGTAGCACTTTCATATCTGTTTCTCGCTAATAACATGCAATACGTCGTCCTTAAGGTGCGCAGATCGAACCTTGGGCTCCTTCTCGGAGAGGAGTGGTTAGCGAAGCACGAGTCGAAGGTTAGAGAGTACGTGTCCAAGTACGAGCGCGTCGGGTGGAGCAAGGTGTTTGCATCGTTACCGGAAAATCCAGCGGCGGAGGTGACGGCAGAGCAGGCGAGGGCCTACTTCGTGAGGTTCGACGCTGTGTTTCATGAAACGTGTAGAAAACAGTCATCGTGGGCGGTGCCCGACCCGAAATTGCGAGAAGAAATCAAAGGCTCGATAGGTTCGAAGCTGGTGCAAAAGTACAACGAATTCTACGAGAAAAATCGGGTCGGATCAAAACCCGTTAGGGATTTCTTACCCGAAAATATTGGGAAATACTTGTCCAACATTTTGTGTGGGAACATTGGAGATTCGGGTAGTGTCTCATCATATTCTTCGTCAACGACGTCGTCTTCATCTCGCTCTAATCGACGGTGA 1857 0.5132 MPRKGMRSIFFKPSPSPSTSTSSLPPPSPLRTFSDSLMEENIQTAHSLIIKWDDSNVTTTLFSGTRQEAKQYLNAVKGLQSAMQYLVAQDSSSATLVRAQFLMQLAMKTLQKEFYQILSSNRDHLDPESVSTRSSIDFRSSFSDYVSDYDDEITVSEDDFRVSETERVSMLAMEDLKAIADCMIASGYGKECVKVYIIMRKSIVDEALYHLGVEKLSFPQVQKMDWEVIELKIKSWLKAIKVAVGTLFHGERILCDHVFASNSGKRIAESCFAEITRDGALSLFGFPEMVAKYKKTPEKMFKILDLYEAISDRWTQIESIFSFESTSVIRSQAVTSMVKLGEAVRTMLTDFETAIQKDSSKKTVPGGGVHPLTRYVMNYLTFLADYSGVLVDIIPDLPQSPLPETYYRSPMREENAPVSELSERIAWLILVVLCKLDGKAEHYKDVALSYLFLANNMQYVVLKVRRSNLGLLLGEEWLAKHESKVREYVSKYERVGWSKVFASLPENPAAEVTAEQARAYFVRFDAVFHETCRKQSSWAVPDPKLREEIKGSIGSKLVQKYNEFYEKNRVGSKPVRDFLPENIGKYLSNILCGNIGDSGSVSSYSSSTTSSSSRSNRR 618
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst11g01452 618 Gene3D Exocyst complex component Exo70 53 596 - -
Spst11g01452 618 FunFam Exocyst subunit Exo70 family protein 55 598 - -
Spst11g01452 618 SUPERFAMILY Cullin repeat-like 66 587 IPR016159 -
Spst11g01452 618 MobiDBLite consensus disorder prediction 1 31 - -
Spst11g01452 618 Pfam Exo70 exocyst complex subunit 234 586 IPR046364 GO:0000145|GO:0005546|GO:0006887
Spst11g01452 618 PANTHER EXOCYST COMPLEX PROTEIN EXO70 32 583 IPR004140 GO:0000145|GO:0006887
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst11g01452 Spst-Chr11 39003425 39005281 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst11g01452 10 594 EXO70 exocyst subunit family AT5G59730 48.046 0.0 548
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst11g01452 K07195 - gmx:100810579 974.156