Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst11g01443 ATGTACACACACAGCAACGCCTCCCTCTCACGCGCCGCCGACTCCCTCGCGCATTTTCTCTCGCCGCCGGACTCATCCACGGCGTCGCCAATGCAGTACGCCAACGCTCCTCAACACCACCACCACCAATTGGCCCTGGGCGAGTTCGACTCGGAGGTGAGTTCGAATAACACGTACAACAGCTGCAGCAGCGGGTGCACGAGCTACATGGGGTCGCCGAGTTCGCTGGCGAGTTACGAGAGTCGGCGAGTGCAGAGGAGCGTTAGCAGCCACTCGCTGCAGAAGACCGGCGGTGGGGCCCACCACCCCTTTTCTCCTCTCTTCGCTCAGTTGCTTGACTCCCAAAACGGCCCCGTACGGAGAGCTTGTAGTACCGGTGACCTTCAGAGGTTCCATGGAATGCAACATTATCATCATTCAGATAGTCCATTGTCAAGTGAAAGTAGCTTGATCATAGAAGAAATGAGCAGAACCAGTCCTTATAGCCCAGAGGAGAAGAAGGTGAGGATTGAGAGATATAGGAGCAAGAGAAACCAGAGGAACTTCGGCAAGAAAATTAAGTATGCTTGCAGGAAGACATTGGCAGATAGCAGGCCACGAATCAGAGGGCGATTTGCCAAGAATGACGAAATTGCAATGAACCCACCAGTTCAGTGGAGCCACATGGGTACTGGAGAGGAAGAGGATGAAGAAGAAGAGAATTGGACCAATTTCTTTGATTCCTTGGTTCCTGCAAATCTTTCTCAGGAGCCTCATGGCAGTAGTTCGTCCTTCGGCGTGTTCTATTAA 789 0.5272 MYTHSNASLSRAADSLAHFLSPPDSSTASPMQYANAPQHHHHQLALGEFDSEVSSNNTYNSCSSGCTSYMGSPSSLASYESRRVQRSVSSHSLQKTGGGAHHPFSPLFAQLLDSQNGPVRRACSTGDLQRFHGMQHYHHSDSPLSSESSLIIEEMSRTSPYSPEEKKVRIERYRSKRNQRNFGKKIKYACRKTLADSRPRIRGRFAKNDEIAMNPPVQWSHMGTGEEEDEEEENWTNFFDSLVPANLSQEPHGSSSSFGVFY 262
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst11g01443 262 Pfam CCT motif 168 208 IPR010402 GO:0005515
Spst11g01443 262 MobiDBLite consensus disorder prediction 77 96 - -
Spst11g01443 262 ProSiteProfiles CCT domain profile. 166 208 IPR010402 GO:0005515
Spst11g01443 262 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 4 28 232 IPR045281 GO:0009909
Spst11g01443 262 MobiDBLite consensus disorder prediction 20 36 - -
Spst11g01443 262 MobiDBLite consensus disorder prediction 20 41 - -
Spst11g01443 262 MobiDBLite consensus disorder prediction 77 99 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst11g01443 Spst-Chr11 38865448 38867680 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst11g01443 162 211 C2C2-CO-like Transcription Factor Family AT5G15850 50.000 3.00e-11 60.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Spst11g01443 CCT 3.3e-18 CL0281
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst11g01443 - - gmx:102667610 420.624
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst5g00600 5 5124743 5126760 Spst11g01443 11 38865448 38867680 PCT