Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst11g01437 ATGGAGCAGAGAGTCAGAATAATGGAGCCTTTTCCGAGAGACAAACGTGGCTCGCTCGAAGTGTTCAACCCTTCGTCTTCTTACTCCACCGAGAAGCCGGTGAACTCACCGCTGCGCACTCAATCCACGTGGAAGACGTGGATTGACTCGCGCGCCGACGAGACACCGGAGCAGCAGCAACGCGCCGGTTCTGATGAGGCCACCGCCACCTCGTGGATGGCTCTCAAGGACTCCACTCCGCCGCCGCCGTCGCGGACGCTTGCCGCAGTGCTCGGCGAGCCTTCAGCGCCAGCGGAGGCCGGGACTGCTGCGAAGCGCGCCGCGGAGTGGGGTCTGGTGCTGAAGACAGACACCAATACCGGGAAGCCGCAGGGAGTAGCGGTTCGGACCTCCGGCGGGGATGAGCCGAGCGCGAAGGTATCCGGTGGGTCGAGGAGAGACTCCGGCAACTCAGTTCGAAGCTCCGGGGAGTCCTCCGATGACGGGAGGGAGTACCGGGGGGGAATTCCGAGGGTTTCGGAGGACCTGAGGGACGCTTTGTCGGCGTTTCAACAAACTTTCGTGGTTTCGGATGCTACCAAACCCGATTACCCGATAATGTATGCCAGTGCCGGGTTTTTCAAGATGACGGGTTATACGTCCAAGGAGGTCATAGGGAGAAACTGGTAA 669 0.6084 MEQRVRIMEPFPRDKRGSLEVFNPSSSYSTEKPVNSPLRTQSTWKTWIDSRADETPEQQQRAGSDEATATSWMALKDSTPPPPSRTLAAVLGEPSAPAEAGTAAKRAAEWGLVLKTDTNTGKPQGVAVRTSGGDEPSAKVSGGSRRDSGNSVRSSGESSDDGREYRGGIPRVSEDLRDALSAFQQTFVVSDATKPDYPIMYASAGFFKMTGYTSKEVIGRNW 222
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst11g01437 222 SUPERFAMILY PYP-like sensor domain (PAS domain) 193 222 IPR035965 -
Spst11g01437 222 MobiDBLite consensus disorder prediction 61 77 - -
Spst11g01437 222 MobiDBLite consensus disorder prediction 20 49 - -
Spst11g01437 222 ProSiteProfiles PAS repeat profile. 172 222 IPR000014 -
Spst11g01437 222 PANTHER PROTEIN TWIN LOV 1 78 221 - -
Spst11g01437 222 MobiDBLite consensus disorder prediction 1 171 - -
Spst11g01437 222 MobiDBLite consensus disorder prediction 1 16 - -
Spst11g01437 222 MobiDBLite consensus disorder prediction 157 171 - -
Spst11g01437 222 Gene3D PAS domain 168 222 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst11g01437 Spst-Chr11 38810531 38811199 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst11g01437 11 222 AGC Kinase Gene Family AT3G45780 58.407 1.39e-63 211