Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst11g01433 ATGCCGAAAGAGTCCCTGCGCCGGGACAAGTGCGCATCAGATATGAATGAAACGGAGGGCTCTGTTTTCTTGGTGGAGCTTGGTCAGAGAAAGAACATGGGTTGCTTTTGTTGCGCTGGGAAATCAAGCACCAATTCGGATACTGAAGACTATGGCCATAACTTCGACCAGAAACCCTCCAATTTCACGGCCACAGAAAGCGTCAAAGTTGATTTCAAAGTGAATGGGAAAAAGGAAGATGGTTCTAAAGGTGATCAACTTGCTCTGGACGTGAAGAATTTAAATTTGAAAGAGGAGGTTTCCCAGGATGGGAAAGATAATGGCAATCGGGCGCAGTCATTCAGTTTTAATGAACTTGAAGCTGCGACGGGAAATTTTACGGCAGATTGCTTTTTGGGTGAAGGAGGCTTTGGCAAGGTTTATAAGGGACACTTGGATAGAATAAACCAGGTTGTAGCAATAAAGCAACTTGACCCTAATGGACTTCAAGGGATTCGGGAATTTGCTGTTGAAGTGTTGACACTGAGTTTGGCAGACCACCCTAATCTTGTCAAGTTGATTGGATTTTGTGCTGAGGGAGAGCAGAGGCTATTAGTTTATGAATTCATGCCATTGGGGTCTTTGGAGAATCATTTGCTTGATCTTCGGACTGGGAGTAAAGCACTGGATTGGAACACTAGAATGAAAATAGCAGCTGGTGCAGCTAGGGGTTTGGAGTATCTGCATGATAAAATGAAGCCTCCTGTCATATATCGGGACTTGAAATGCTCTAACATTTTGTTAGGAGAGGGATATCATCCTAAGTTGTCAGATTTTGGCTTGGCAAAAGTAGGCCCAAGTGGTGATAAGACCCATGTTTCAACAAGGGTTATGGGTACATATGGGTATTGTGCCCCAGATTATGCAATGACGGGTCAGTTGACATTTAAGTCAGATATTTACAGCTTTGGGGTTGTTCTTTTGGAGCTTATTACAGGCCGGAAGGCTATTGACCATATGAAACCTGCCAAAGAACAAAATCTAGTTGCATGGGCAAGACCCTTGTTCAGAGATAGGAAAAAATTTCCCCAGATGGTTGACCCTTTACTTGAAGGTCGATATCCCGTGAGAGGCTTATACCAAGCTCTTGCCATTGCTGCAATGTGTGTTCAAGAGCAGCCTAATATGCGACCTGTTATAGTTGATGTTGTTACAGCTCTAAATTACCTAGCTTCTCAGAAGTACGATCCTGAACATCATCCGGCACAAAGCTCTAGAAGAAGTCCACCTTCTCAGGTAATGCAAAGGGATGATGATGATGAACGTAGACTTATTTTAACCTCGGAGCATGGAACAGACAGATCTTAA 1347 0.4358 MPKESLRRDKCASDMNETEGSVFLVELGQRKNMGCFCCAGKSSTNSDTEDYGHNFDQKPSNFTATESVKVDFKVNGKKEDGSKGDQLALDVKNLNLKEEVSQDGKDNGNRAQSFSFNELEAATGNFTADCFLGEGGFGKVYKGHLDRINQVVAIKQLDPNGLQGIREFAVEVLTLSLADHPNLVKLIGFCAEGEQRLLVYEFMPLGSLENHLLDLRTGSKALDWNTRMKIAAGAARGLEYLHDKMKPPVIYRDLKCSNILLGEGYHPKLSDFGLAKVGPSGDKTHVSTRVMGTYGYCAPDYAMTGQLTFKSDIYSFGVVLLELITGRKAIDHMKPAKEQNLVAWARPLFRDRKKFPQMVDPLLEGRYPVRGLYQALAIAAMCVQEQPNMRPVIVDVVTALNYLASQKYDPEHHPAQSSRRSPPSQVMQRDDDDERRLILTSEHGTDRS 448
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst11g01433 448 ProSitePatterns Protein kinases ATP-binding region signature. 132 155 IPR017441 GO:0005524
Spst11g01433 448 ProSitePatterns Serine/Threonine protein kinases active-site signature. 249 261 IPR008271 GO:0004672|GO:0006468
Spst11g01433 448 MobiDBLite consensus disorder prediction 425 448 - -
Spst11g01433 448 CDD STKc_IRAK 132 401 - -
Spst11g01433 448 FunFam probable serine/threonine-protein kinase RLCKVII 98 202 - -
Spst11g01433 448 FunFam Serine/threonine-protein kinase PBS1 203 418 - -
Spst11g01433 448 PANTHER OS07G0668900 PROTEIN 66 412 - -
Spst11g01433 448 ProSiteProfiles Protein kinase domain profile. 126 403 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst11g01433 448 MobiDBLite consensus disorder prediction 408 448 - -
Spst11g01433 448 SUPERFAMILY Protein kinase-like (PK-like) 112 424 IPR011009 -
Spst11g01433 448 Gene3D Transferase(Phosphotransferase) domain 1 203 421 - -
Spst11g01433 448 SMART serkin_6 126 403 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst11g01433 448 Pfam Protein tyrosine and serine/threonine kinase 131 342 IPR001245 GO:0004672|GO:0006468
Spst11g01433 448 Gene3D Phosphorylase Kinase; domain 1 96 202 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst11g01433 Spst-Chr11 38785829 38790238 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst11g01433 33 405 Glycoside Hydrolase AT3G07070 54.400 9.25e-142 410
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-1 Spst11g01433 PK_Tyr_Ser-Thr 4e-42 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst11g01433 - - gmx:100804000 748.814