Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst11g01431 ATGGGTAGCATTGCTGTATTTAGTTCATGGACTAAATGTCGAGCTCAAGTTGGCAGCCCTCATCCAGTTTCACCTCAGAAGCAATTGATTGATGCCCCTGATAGCACTTGTGCCCAAGTGATGCAAACAAAGACTCAAAAAGCTAATAGTAGACGGGTGCATGCAACAGAAAAAGAGTGCCTTGAACTTATTGATCATCTTGATGATGTTGCAATGGGTAAGGACTTGGCTGTGGGAATATCTTTGAATATGCAACTTGAGCATCCACTTGAGAGACTGTCTGGCCATCCAACGGGTAAAGGGGCAAATAAGATGTCTGATGTTGATAATATGCAGATAGTTAAAGGACAGAATAATGTATGTGAAAAAGTACAACTAGAATACAATGTTGATAAAACCAGGACACAGGAAAATCAGCCTATGAATGTTATTGATGTTACTGATAGCAATAGTCCACAGACTGAAAGCAGATACTTGAACACTCCAAATGGGTTTTCCGGTTTCTCACTAACAAAAGAAAACTGTTGCGCCAAAGAGCATCCATCCCTGGAACTAACTTTGAAAAGGCTGGGAGAAGTAAGAGATGCTAAAAATGTCACAGGTGAAGAATGCAATGTATTGAGACATTCAGATCAGTCGGCATTCTCAAAATATAATACTGCTTCTTCTGCTAACCAGGCTCAAACTGGAAATGTAGGGAGCTGTTCCCCTCTAGCCAATGGCTCAGCTGCACCAAATGCGGAGATAGTACACAACTTTCCATCTCATTCCAACGTCACTCCTCCAAACCAACAATCTAATGGGAGCAACAACATCAATGACATGGCCTCCACTAATACATATCTTGGCACCAAACCTGATACTTTTGACAAAAAGCCAGAGTCTGTAAGAGGGATGGGCTCATTTAATTCTTCTGAACTCCAAACTTTGCAGAACAATAGTATCTCTTCGTCTCAGAAGAAAACTTATGCCCGGGAAGAATATATGGAAATTGTTAAAGGACAAGTGGGAGGCTCTGAATATGAATTCCAAGTCGAGCACACACATTATGAGCTTCACCGTTATAATCACATTTCCCATAAAGCTGCAGTAGATATTCAATCAGATCATGATCTCTTTCTCAAAAGCTCAACCAACGCTGCTCAGCAATGTGTATCATCAAATGCATTTGGAGGGCCAGCAGAAAGTAATGCTGCAAACTACACAGTAGATGGAAATGCTGTGGAGAGCGATCATGGGAGCAATGGACAGGATGGAACCATGACAATGAGAACGATAAATATGGAAAATGGCAATGTGGCTGTGGGGAGCATTGGAGTTGGCAGCATTGATAGGAAAAACATTGGGAATGGAACAGATGATGGACGACTTGCATTGAGAGAGGCTGCCTTGACCAAATTCCGTCAAAAGAGAAAAGAAAGATGCTTTGAGAAAAGGGTTCGATACCATAGCAGAAAAAAACTAGCGGAACAACGGCCTCGTATTAGAGGACAATTTGTTAGACGAATAGTCCCTGAAGCCAAAGAAGAAAAAGATCACCAAAGTGACAACCTGGTACGTATTGATAATAGCGACTTTCACCAATAA 1587 0.4152 MGSIAVFSSWTKCRAQVGSPHPVSPQKQLIDAPDSTCAQVMQTKTQKANSRRVHATEKECLELIDHLDDVAMGKDLAVGISLNMQLEHPLERLSGHPTGKGANKMSDVDNMQIVKGQNNVCEKVQLEYNVDKTRTQENQPMNVIDVTDSNSPQTESRYLNTPNGFSGFSLTKENCCAKEHPSLELTLKRLGEVRDAKNVTGEECNVLRHSDQSAFSKYNTASSANQAQTGNVGSCSPLANGSAAPNAEIVHNFPSHSNVTPPNQQSNGSNNINDMASTNTYLGTKPDTFDKKPESVRGMGSFNSSELQTLQNNSISSSQKKTYAREEYMEIVKGQVGGSEYEFQVEHTHYELHRYNHISHKAAVDIQSDHDLFLKSSTNAAQQCVSSNAFGGPAESNAANYTVDGNAVESDHGSNGQDGTMTMRTINMENGNVAVGSIGVGSIDRKNIGNGTDDGRLALREAALTKFRQKRKERCFEKRVRYHSRKKLAEQRPRIRGQFVRRIVPEAKEEKDHQSDNLVRIDNSDFHQ 528
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst11g01431 528 MobiDBLite consensus disorder prediction 506 528 - -
Spst11g01431 528 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 4 171 502 IPR045281 GO:0009909
Spst11g01431 528 Pfam CCT motif 460 501 IPR010402 GO:0005515
Spst11g01431 528 ProSiteProfiles CCT domain profile. 460 502 IPR010402 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst11g01431 Spst-Chr11 38762675 38766018 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst11g01431 453 504 Response Regulator Gene Family AT5G02810 75.000 3.00e-20 92.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Spst11g01431 CCT 1.1e-15 CL0281
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst11g01431 K12129 - gmx:100785796 689.108