Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst11g01429 ATGCACGAAACGACGGCGTTTGGGGCTTGTGGGTTTGAGGGGAGAACCTTTATACGCGAGTTGCTGCTTCGAGCTCGCAAATGGAGGTATAGGGCTGGTCCAATGAACAATAATGTTGGGAAAGGGAAAAAAGGTTTGGCAGAACATAATAATCATATGATTTTTGACAAAAAGAGTCTCCATTATGGAGTAGTCAATGGAGGGGTAGGTTCTGGATCATCAGCAGAAGATGACACAAGATTTAGTAAGCTAACTGAAGATGGAAACAATGGGTTGAGGGGTCTGATTCAAATCAATGGGAGCTTGCAGGTTTCACAGCAACCACCACAAGGACCAGTCATATGCTGGGAGAGATTTCTCCCTGTGAGATCAATTAAAGTTTTGCTGGTGGAAGATGATGATTCAACACGCCATGTTGTGCGTGCTCTGTTACGCAATTGTAGTTACGAAGTTACTGCTGTTTCCAATGGTCTTCAAGCATGGAAAGTCCTCGAAAATCCAGAAAATTGCATTGGTCTTGTCCTAACAGAGGTAGCTATGCCTATTTTGTCTGGAATAGGTCTTTTGTGCAAGATCATGAACCACAAAAATCTGAGGCATATCCCTGTGATTATGATGTCATCTCATGATTCTATGGGTATAGTCTTTAAGTGTTTGTCAAAAGGCGCTGTTGATTTTTTAGTGAAACCTATTCGGAGGAATGAACTTAAAAATCTCTGGCAGCATGTTTGGAGAAGATGCCACAGTGTGAGTTGA 756 0.4233 MHETTAFGACGFEGRTFIRELLLRARKWRYRAGPMNNNVGKGKKGLAEHNNHMIFDKKSLHYGVVNGGVGSGSSAEDDTRFSKLTEDGNNGLRGLIQINGSLQVSQQPPQGPVICWERFLPVRSIKVLLVEDDDSTRHVVRALLRNCSYEVTAVSNGLQAWKVLENPENCIGLVLTEVAMPILSGIGLLCKIMNHKNLRHIPVIMMSSHDSMGIVFKCLSKGAVDFLVKPIRRNELKNLWQHVWRRCHSVS 251
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst11g01429 251 SUPERFAMILY CheY-like 123 248 IPR011006 -
Spst11g01429 251 SMART REC_2 125 240 IPR001789 GO:0000160
Spst11g01429 251 ProSiteProfiles Response regulatory domain profile. 126 244 IPR001789 GO:0000160
Spst11g01429 251 Pfam Response regulator receiver domain 127 238 IPR001789 GO:0000160
Spst11g01429 251 CDD psREC_PRR 127 230 - -
Spst11g01429 251 PANTHER TWO-COMPONENT RESPONSE REGULATOR 126 247 IPR045279 GO:0009736
Spst11g01429 251 Gene3D - 124 250 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst11g01429 Spst-Chr11 38733536 38737918 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst11g01429 72 248 Response Regulator Gene Family AT5G60100 65.537 2.41e-77 238
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Spst11g01429 Response_reg 3.6e-22 CL0304
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst11g01429 K12129 - gmx:100785796 387.882