Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst11g01422 ATGGGAAAGTCTTACCCAACCGTGAGCGCGGAATACCAGAAGGCCGTTGAGAAGGCCAGGAGAAAGCTTAGAGGCTTCATTGCCGATAAGAAATGCGCTCCTCTAATGCTCCGTTTGGCATGGCACTCTGCTGGTACCTACGACGTGAGCACGAAGACTGGTGGCCCCTTTGGAACCATCAAGCATCCTTCAGAGCTCGCGCACGGTGCCAACAACGGTCTTGATATCGCCGTTAGGCTTTTGGAGCCTCTTAAGGCGGAGTTCCCTATCTTGAGCCATGCAGATTTCTACCAGTTGGCTGGAGTTGTTGCAGTTGAGGTAACTGGTGGACCTGAAATTCCTTTCCACCCTGGGAGAGAGGACAAGCCCGAGCCACCCCCAGAGGGTCGCTTGCCTGATGCGACCAAGGGATCTGATCACTTGAGGGATGTGTTCGGCAAGGCTATGGGACTTAGTGATCAAGATATTGTTGCTCTGTCCGGTGGTCACACACTTGGATCGGCACACAAGGAGCGTTCTGGATTTGAGGGCCCCTGGACCTCAAACCCTCATGTTTTTGATAACTCATACTTTAAGGAGTTGTTGAGTGGTGAGAAGGAAGGCCTCCTTCAGCTGCCTTCTGACAAGGCACTTTTGTCTGACCCTGTATTCCGCCCTCTGGTTGAAAAATATGCTGCTGACGAAGATGCCTTCTTCGCTGATTACGCCGTGGCTCACCAAAAGCTTTCCGAGCTTGGGTAA 741 0.5236 MGKSYPTVSAEYQKAVEKARRKLRGFIADKKCAPLMLRLAWHSAGTYDVSTKTGGPFGTIKHPSELAHGANNGLDIAVRLLEPLKAEFPILSHADFYQLAGVVAVEVTGGPEIPFHPGREDKPEPPPEGRLPDATKGSDHLRDVFGKAMGLSDQDIVALSGGHTLGSAHKERSGFEGPWTSNPHVFDNSYFKELLSGEKEGLLQLPSDKALLSDPVFRPLVEKYAADEDAFFADYAVAHQKLSELG 246
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst11g01422 246 Gene3D - 19 246 - -
Spst11g01422 246 Gene3D Peroxidase, domain 2 132 239 - -
Spst11g01422 246 MobiDBLite consensus disorder prediction 115 137 - -
Spst11g01422 246 FunFam Cytosolic ascorbate peroxidase 19 138 - -
Spst11g01422 246 PRINTS Plant ascorbate peroxidase signature 130 147 IPR002207 GO:0004601|GO:0006979|GO:0020037
Spst11g01422 246 PRINTS Plant ascorbate peroxidase signature 149 170 IPR002207 GO:0004601|GO:0006979|GO:0020037
Spst11g01422 246 PRINTS Plant ascorbate peroxidase signature 197 222 IPR002207 GO:0004601|GO:0006979|GO:0020037
Spst11g01422 246 PRINTS Plant ascorbate peroxidase signature 12 32 IPR002207 GO:0004601|GO:0006979|GO:0020037
Spst11g01422 246 PRINTS Plant ascorbate peroxidase signature 51 61 IPR002207 GO:0004601|GO:0006979|GO:0020037
Spst11g01422 246 PRINTS Plant ascorbate peroxidase signature 33 48 IPR002207 GO:0004601|GO:0006979|GO:0020037
Spst11g01422 246 PRINTS Plant ascorbate peroxidase signature 109 121 IPR002207 GO:0004601|GO:0006979|GO:0020037
Spst11g01422 246 PRINTS Plant ascorbate peroxidase signature 90 108 IPR002207 GO:0004601|GO:0006979|GO:0020037
Spst11g01422 246 PRINTS Plant ascorbate peroxidase signature 171 195 IPR002207 GO:0004601|GO:0006979|GO:0020037
Spst11g01422 246 PRINTS Plant ascorbate peroxidase signature 65 89 IPR002207 GO:0004601|GO:0006979|GO:0020037
Spst11g01422 246 PANTHER THYLAKOID LUMENAL 29 KDA PROTEIN, CHLOROPLASTIC-RELATED 8 246 IPR044831 GO:0004601|GO:0034599
Spst11g01422 246 ProSitePatterns Peroxidases proximal heme-ligand signature. 155 165 IPR019793 -
Spst11g01422 246 FunFam L-ascorbate peroxidase, cytosolic 132 239 - -
Spst11g01422 246 MobiDBLite consensus disorder prediction 112 137 - -
Spst11g01422 246 PRINTS Haem peroxidase superfamily signature 109 121 IPR002016 GO:0004601|GO:0006979|GO:0020037
Spst11g01422 246 PRINTS Haem peroxidase superfamily signature 91 108 IPR002016 GO:0004601|GO:0006979|GO:0020037
Spst11g01422 246 PRINTS Haem peroxidase superfamily signature 155 170 IPR002016 GO:0004601|GO:0006979|GO:0020037
Spst11g01422 246 PRINTS Haem peroxidase superfamily signature 179 194 IPR002016 GO:0004601|GO:0006979|GO:0020037
Spst11g01422 246 PRINTS Haem peroxidase superfamily signature 33 47 IPR002016 GO:0004601|GO:0006979|GO:0020037
Spst11g01422 246 Pfam Peroxidase 22 227 IPR002016 GO:0004601|GO:0006979|GO:0020037
Spst11g01422 246 SUPERFAMILY Heme-dependent peroxidases 2 246 IPR010255 GO:0004601|GO:0006979|GO:0020037
Spst11g01422 246 ProSiteProfiles Plant heme peroxidase family profile. 74 246 IPR002016 GO:0004601|GO:0006979|GO:0020037
Spst11g01422 246 ProSitePatterns Peroxidases active site signature. 33 44 IPR019794 GO:0004601
Spst11g01422 246 CDD ascorbate_peroxidase 5 246 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst11g01422 Spst-Chr11 38608635 38610474 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst11g01422 72 246 Peroxidase AT4G17690 32.864 7.45e-20 85.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst11g01422 K00434 - gmx:606508 470.7
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst11g01422 11 38608635 38610474 Spst11g01422 11 38608635 38610474 ECH