Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst11g01419 ATGGATCGGTTCATAGAAAACTTGCCGCCAATGGATCTGATGCGCTCCGAGAAGATGACCTTCGTGCAGCTCATCATTCCCGCTGAGTCCTCGCACCGCGCCATCACCTATTTGGGCGAACTCGGCCTCCTTCAATTCCGAGACGTAACTCTCTCTCAGATCTATTATCCTTTCATTCAATTCCGTTTGTCATGGCTTCCGTTATTTTTTTTCTATGGAAACGTGTTTATATGCGTTAGCTTTGGTGTTTGTTGCGTTGCTCCAATCGAGTGCGTGAAGGTTTGGCGTTTCCGTCGACAAACGGTTAACGCGCGGCATTGTTTAGATTTGAATTTGTGTGTTGAGTTTAGGAATCTGGTGCTATTAAATGCTGAAAAAAGCCCCTTCCAGAGAACATTTGTTAACCAGTCTGGATATGAGGTAAAGCGATGTGCAGAAATGTCAAGAAAGCTACGATTCTTCAAGGATCAAATCACTAAGGCTGGTCTTATGTCTTCTCCTTCAGTCTTGCAATCAGATATTCATCTGGAGGACTTAGAGATACAACTTGCTGAGCATGAACATGAGCTAATTGAAATGAACTCTAACAGTGAGAAACTTCGGCAATCGTATAATGAACTCCTGGAGTTCAAAATTGTATTAGAAAAGGCATGCGGTTTTCTTGTTTCAAACCGGGGCACTGCCATTACAGAAGAGCGAGAACTGCATGAGACTGTTTTCTCAAAAGGAGACTATGTTGAGACACCATTTTTGTTTGAACAGGAAATGACGCCTGCAGCATCAAATCAATCTGGTTTAAGATTTATCAGTGGGATAATTTGTAAATCCAAGGTTCTTAGATTTGAAAGGATGCTGTTTCGAGCCACAAGAGGGAATATGCTTTTCAATCAGGCACCAGCTGATGAACAAATCGTGGATCCTATTTCAAATGAGATGGTTGAGAAGACTGTCTTTGTTGTGTTTTTCTCTGGGGAGCAAGCAAGAACAAAGATCCTGAAAATTTGTGATGCATTTAGTGCAAATTGTTACCCTGTTCCCGAAGATATAAGTAAGCAGAGGCAAATAACATCAGAGGTTTCAGCACGTCTTACTGACTTAGAGACAACTCTGGATGCTGGAATTAGGCATCGGAATAAGGCTCTTGCTTTTGTAGCAGGCCCTTTAACAAAATGGATGGACATGGTAAGAAGAGAGAAGTCTGTGTATGATACACTGAACATGTTAAATTTTGATGTCACCAAAAAATGTCTCGTTGGGGAGGGCTGGTGCCCTGTATTTGCAAAAACACAGATTCAGGAGGCACTGCAACGTGCAACTTTTGACAGCAATTCTCAAGTTGGTATAATCTTTCATTCAATGGATACACAGGAATCACCACCTACATATTTTAGGACTAACAATTTCACAAGTCCATATCAGGAAATTGTTGATGCATATGGTGTTGCAAGATATCAAGAAGCAAATCCTGCAGTTTATACAACTATTATATTCCCTTTTCTTTTTGCGGTGATGTTTGGCGACTGGGGTCATGGAATTTGCCTTTTGCTGGGAGCATTAGTTCTTATAGCACGTGAAAACAAGCTTAGCACCCAGTATCTTGAAATGTATTATGGTAATAATTCTATTGTACTGCACACAAGTGCGAAAGAGTTGCACAATTTCCTTTCCTTTTGTTCTGCTCTTGGTATTGGAATTAAATGCATCACAGTTATTCTATTTGATTTCTGCCAGCGACTTGGAAGCTTTATGGAGATGCTATTTGGTGGACGCTATGTGCTACTTCTGATGGATGCACATACTACCGGCTTAGTAAAATACAGAGAACCATATCCATTTGGTGTGGATCCCAGCTGGCGGGGAAGTCGTTCAGAATTGCCTTTTCTAAACTCTCTCAAGATGAAGATGTCCATTCTATTTGGCGTGGTGCACATGAACTTGGGAATTATATTAAGTTATTTCAATGCTCGTTTCTTTGGCAGCTTACTGGATATAAGGTACCAGTTTGTGCCACAGATGATTTTCCTCAACTGTCTATTTGGGTATCTCTCCCTTCTCATCATTATTAAGTGGTGCACTGGCTCTCAGGCAGATCTTTATCATGTAATGATTTACATGTTTTTAAGTCCTTTTGACAATCTTGGTGAGAATCAGTTGTTCTGGGGCCAAAGGCCACTTCAAGTTCTGTTATTGCTTTTGTCTTTAATTGCAGTTCCGTGGATGCTCTTTCCAAAACCTTTTATGCTAAAGAAGCTTCATAATGAGAGATTTCAAGGACGCACTTATGGTATACTTAATACCTCTGAGGTTGATCATGAGGAGGAACCAGGTTCTGCCAGACAACATCATGAGGAATTCAATTTCACTGAGGTCTTCGTTCATCAAATGATTCACTCTATTGAATTTGTTCTAGGTTCAGTTTCAAATACGGCCTCATATCTACGACTTTGGGCATTAAGCTTGGCTCACTCAGAACTTTCTACCGTATTTTATGAGAAAGTCCTGCTACTTGCTTGGGGGTATGACAATCTTGTCGTTCGGTTACTGGGGCTTGCTGTCTTTTCCTTTGCAACTGCCTTTATACTATTAATGATGGAGAGTCTCAGTGCTTTTCTTCACGCCTTGCGTCTTCACTGGGTGGAATTTCAGAATAAATTTTACCATGGTGATGGATATAAGTTCAGGCCTTTTTCCTTTGCCTCCTTAACTGATGATGAAAATTGA 2721 0.4079 MDRFIENLPPMDLMRSEKMTFVQLIIPAESSHRAITYLGELGLLQFRDVTLSQIYYPFIQFRLSWLPLFFFYGNVFICVSFGVCCVAPIECVKVWRFRRQTVNARHCLDLNLCVEFRNLVLLNAEKSPFQRTFVNQSGYEVKRCAEMSRKLRFFKDQITKAGLMSSPSVLQSDIHLEDLEIQLAEHEHELIEMNSNSEKLRQSYNELLEFKIVLEKACGFLVSNRGTAITEERELHETVFSKGDYVETPFLFEQEMTPAASNQSGLRFISGIICKSKVLRFERMLFRATRGNMLFNQAPADEQIVDPISNEMVEKTVFVVFFSGEQARTKILKICDAFSANCYPVPEDISKQRQITSEVSARLTDLETTLDAGIRHRNKALAFVAGPLTKWMDMVRREKSVYDTLNMLNFDVTKKCLVGEGWCPVFAKTQIQEALQRATFDSNSQVGIIFHSMDTQESPPTYFRTNNFTSPYQEIVDAYGVARYQEANPAVYTTIIFPFLFAVMFGDWGHGICLLLGALVLIARENKLSTQYLEMYYGNNSIVLHTSAKELHNFLSFCSALGIGIKCITVILFDFCQRLGSFMEMLFGGRYVLLLMDAHTTGLVKYREPYPFGVDPSWRGSRSELPFLNSLKMKMSILFGVVHMNLGIILSYFNARFFGSLLDIRYQFVPQMIFLNCLFGYLSLLIIIKWCTGSQADLYHVMIYMFLSPFDNLGENQLFWGQRPLQVLLLLLSLIAVPWMLFPKPFMLKKLHNERFQGRTYGILNTSEVDHEEEPGSARQHHEEFNFTEVFVHQMIHSIEFVLGSVSNTASYLRLWALSLAHSELSTVFYEKVLLLAWGYDNLVVRLLGLAVFSFATAFILLMMESLSAFLHALRLHWVEFQNKFYHGDGYKFRPFSFASLTDDEN 906
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst11g01419 906 Pfam V-type ATPase 116kDa subunit family 605 898 IPR002490 GO:0033179|GO:0046961|GO:1902600
Spst11g01419 906 Pfam V-type ATPase 116kDa subunit family 114 533 IPR002490 GO:0033179|GO:0046961|GO:1902600
Spst11g01419 906 Coils Coil 176 203 - -
Spst11g01419 906 PIRSF ATP6V0A1 9 59 IPR026028 GO:0000220|GO:0046961
Spst11g01419 906 PIRSF ATP6V0A1 100 906 IPR026028 GO:0000220|GO:0046961
Spst11g01419 906 PANTHER VACUOLAR PROTON ATPASES 113 904 IPR002490 GO:0033179|GO:0046961|GO:1902600
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst11g01419 Spst-Chr11 38573677 38586960 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst11g01419 114 899 Primary Pumps ATPases(2) AT2G28520 71.303 0.0 1125
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst11g01419 K02154 - gmx:100800799 1298.49
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst5g00582 5 4852144 4867674 Spst11g01419 11 38573677 38586960 PCT