Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst11g01410 ATGGATTTCACAGAAGACTTCACCTTCTTATCGGAGCAACACCGCGAGTTCGACGCCGCGGAGGCCATGGAATCCGACCTCGACTTCGCCTTCAACCTCCAGTTACAGGAGGCTCTCGAGGCCTCCCTCGCAGTCCATCCCTCCTCCTCCGCTACCGCCGAGGTGATCGAACAACCTATCGTCGACAACGAGGACGTGAATGCGACGGCGCTGCAGTGCAAGGAGCTGGCGCGCGTGGAGTGCGAAATGAAGGACAGGGAGCGGAGCGAGAGGGAAATGCAGAAGATGAGAGAGGATTTAACCCGTCGGATCCACGACTGGAAGGTGGCGAGGGAGATTTCGAGGATTTCTGAGGCGGATTGGCAGGAGTGGGGCGATAACTTTGAGAAACCGTTCGGCGAGGGCTCATCTTCGTTGGGGAGGACAAATGAAGACTTGGTTAGGGTTTACTTCAAGGGTTTGGTGAGCGAGGAAAACACCGAGGGGAAGAGAGTTGTGCTGTCTGGGATAGGGGTTGCGATTTGTGACCTTGATGATAATTTGATATTTGAGATTTCTAAGTCGGTGATTGGGAATGGCAGTGGCAAGGTCGCTGCGGAGATTAAGGCGTTCATTGAAGCCCTCAATGCGGCCCTTTCTTTGGGCTTGAAGTGCATCCATTGCTGTTCCGACTATTATACGTTTTTCCAAGTTGTGAGTCCATGTTAA 708 0.5325 MDFTEDFTFLSEQHREFDAAEAMESDLDFAFNLQLQEALEASLAVHPSSSATAEVIEQPIVDNEDVNATALQCKELARVECEMKDRERSEREMQKMREDLTRRIHDWKVAREISRISEADWQEWGDNFEKPFGEGSSSLGRTNEDLVRVYFKGLVSEENTEGKRVVLSGIGVAICDLDDNLIFEISKSVIGNGSGKVAAEIKAFIEALNAALSLGLKCIHCCSDYYTFFQVVSPC 235
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst11g01410 235 Coils Coil 79 99 - -
Spst11g01410 235 Gene3D - 146 233 IPR036397 GO:0003676
Spst11g01410 235 Pfam Reverse transcriptase-like 166 232 IPR002156 GO:0003676|GO:0004523
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst11g01410 126 216 C3H Transcription Factor Family AT2G19610 33.333 4.26e-07 48.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst11g01410 - - gmx:100790037 299.286
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst11g01410 11 38468483 38469190 Spst11g01410 11 38468483 38469190 ECH