Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst11g01373 ATGGCTTCCTCCGACACTCCCAAACCCCACAAATCTCCCAAAATAAAGAATGGAGAAATCTCCACAACCCAAAGTAAAATTAAGAAGAAGAATCGAGACATGGCGAAAGAGGAGGGCGAAAAGAAGAAGAGTAAGAAGCCCAAACTCAGCAACGGCCATTCAAAGCAGCCGCAGGAAAAGGGCGCTGAAGGAAGCGGTGAAGATGCGAAGACCAACGTCTTTCCCATGAATCGTATCAGGACCATGATCAAGGGCGAAGATCCTGATATGCGTGTTTCCCAGGAAGCGGTGTTAGCCATCAACAATGCTGTGGAGAAGTTCCTTGAGCAATTCACGCAGGACGCGCATGCTTTTTGTGTTCAGGACCGTAAGAAATGCCTCAGTTACAAGCACGTTGCGAATGTCGTTAGTAAGAAGAGAAGATATGACTTTCTGTCCGATTTTGTTCCTGAGAAAGTGAAAGCTGAGGATGCATTAAGAGAGAGAAGTGCAGCAACTAATGGAGTATTTCAGAAAATGTAA 522 0.4559 MASSDTPKPHKSPKIKNGEISTTQSKIKKKNRDMAKEEGEKKKSKKPKLSNGHSKQPQEKGAEGSGEDAKTNVFPMNRIRTMIKGEDPDMRVSQEAVLAINNAVEKFLEQFTQDAHAFCVQDRKKCLSYKHVANVVSKKRRYDFLSDFVPEKVKAEDALRERSAATNGVFQKM 173
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst11g01373 173 Coils Coil 170 173 - -
Spst11g01373 173 Gene3D Histone, subunit A 14 151 IPR009072 GO:0046982
Spst11g01373 173 PANTHER HISTONE-LIKE TRANSCRIPTION FACTOR CCAAT-RELATED 42 167 - -
Spst11g01373 173 MobiDBLite consensus disorder prediction 1 76 - -
Spst11g01373 173 SUPERFAMILY Histone-fold 59 145 IPR009072 GO:0046982
Spst11g01373 173 MobiDBLite consensus disorder prediction 23 45 - -
Spst11g01373 173 Pfam Histone-like transcription factor (CBF/NF-Y) and archaeal histone 74 136 IPR003958 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst11g01373 63 135 CCAAT-HAP5 Transcription Factor Family AT1G07980 39.726 1.01e-14 66.6
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NF-YC Spst11g01373 CBFD_NFYB_HMF 1.4e-13 CL0012
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst11g01373 - K03506 gmx:100793738 213.772
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst11g01373 11 38204504 38208572 Spst11g01373 11 38204504 38208572 ECH