Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst11g01340 ATGACACATGTTAAGATGATAATCCTTGTCGGTGGTGAAACAAGGGAGTGGAACCTAGAAGAGATTGTTACTAGAGGTGTAAAGGGAAGAACTGGTTGGTTTTATGTGACATGGATTTGCTTGCAGTTGCAGCATTGTCTATGTATGGCTTCTGATTGTTCAAGATTTGTAAGATTTCAAGATGACCCTGAACTTGTAAAATGGCCAACAACAAACGGTGGCAATGGAATCAGGCGCAATGGAACACAAGAAGCTGGGACAAGGGGTAAAAAGGGTCTGAAGGAGACAAGGAAGTTCTTGAAGACTAGAGTATTGTCAAGAGTATTCTCAGAGGATTATGAGAGAGTTAGAAAAAGAACTTTATTAGATCCCCGGGGACAAACCATTCACCGATGGAATAAAATTTTCTTGGTAGCATGTTTAGTATCTTTGTTTGTGGACCCTCTATTCTTTTATTTGCCACTAGTTCGAGACGAAGTGTGCATTGATATTGGAACAGCACTTGAAGTTTTCCTGACAATGATAAGATCCATGGCAGATGTGTTTTACATGATTCAGATTCTCATGAAGTTTCGAACAGCTTATGTTGCTCCTTCTTCTCGGGTATTTGGGAGGGGAGAACTTGTCATAGACACTTCTAAGATAGCTACTAGGTACCTGAGAAAGGGTTTTTGGCTAGACTTCATCGCTGCATTACCTCTTCCTCAGGTGTTAATTTGGATTGTGATCCCCAATCTTGGAGGTTCAACCATGGCAAACACAAAAAATGTGCTTCGCTTTATCATCATTTTCCAATATCTACCAAGGTTATTTCTGATTTTTCCACTTTCATCCCAAATTGTAAAAGCTACTGGGGTTGTGACAGAAACAGCATGGGCAGGGGCTGCTTACAACTTGGTGTTGTACATGTTGGCTAGCCATTTTTTAGGAGCTAGCTGGTACCTTCTATCGATTGAGCGACAAGAAGCGTGCTGGAGGAGTGTCTGCGATATGGAGCAATCTTGTCAATATGGATTCTTTGACTGCAGACGGATTGAAGATTCCTTCAGGGTGTCCTGGTTTATAGCAAGTAATATCACAATTTTATGCTCACCAAAGGCTAACTTCTATCAGTTTGGTATATACGGTGATGCTGTGACATCCCAAGTCACTACCTCATCATTCTTTCACAAGTACTTCTTTTGTCTTTGGTGGGGCCTAAGGAATCTGAGTTCATTGGGACAAGGTCTTCTTACTAGCACTCTTGTTGGAGAAATAATGTTTGCCATTGTTGTTGCAACCCTTGGACTGGTTCTTTTCGCGTTACTTATTGGTAATATGCAGACATATCTCCAATCAACTACTGTTCGCTTAGAAGAGTGGAGGGTGAGGAGAACTGATACAGAACAATGGATGCATCACAGGCAGCTACCCCCAGAACTTAGACAATCTGTGCGCAAATATAACCAATATAAATGGCTGGCCACACGGGGGGTAGATGAAGAAGCTCTTCTCGAAGGACTTCCAGCTGATCTTCGGAGAGACATCAAGCGCCACCTTTGCCTTGAACTAGTTCGACGAGTGCCGTTGTTCGATCAAATGGACGAGAGAATGCTCGACGCAATATGCGAGAGGCTGAAACCGGCACTGTGCACGGAGAACACGTACCTTGTTCGCGAGGGCGATCCCGTGAACGAAACTCTCTTCATAATCAGAGGGCACCTGGATTCCTACACCACCAACGGAGGCCGCACCGGTTTCTTCAACTCTTGCCGCATTGGGCCCGGCGATTTCTGCGGCGAGGAGCTGCTCACGTGGGCCTTGGGCCCACGGCCCAGCTTCATCCTCCCTTCCTCCACTCGAACCGTCAAGGCCATCTCCGAAGTGGAGGCCTTCGCCCTCATAGCCGAAGACCTCAAGTTCGTGGCCTCACAGTTCAGAAGACTACACAGCAAACAACTCAGACACAAGTTCAGGTTTTACTCGCACCAGTGGAGAACGTGGGCTGCATGCTTCATACAAGCTGCATGGAGACGCTACAAGAAGCGAAAGGAAGCTGCAGAACTTAGAGCTTTGAGCTACTTTCAGTCCATGGGTGAGGGTGAGGGTGAAGCGATGATGACAAGGAAAGGTATTGTGCATCATGCTCATTCTGGAATGGATTCAGATGGAGTTGTCAACTCTTTGCAGAAGCCAGAAGAACCAGATTTTTCTGTTGGTGAGTGA 2205 0.4544 MTHVKMIILVGGETREWNLEEIVTRGVKGRTGWFYVTWICLQLQHCLCMASDCSRFVRFQDDPELVKWPTTNGGNGIRRNGTQEAGTRGKKGLKETRKFLKTRVLSRVFSEDYERVRKRTLLDPRGQTIHRWNKIFLVACLVSLFVDPLFFYLPLVRDEVCIDIGTALEVFLTMIRSMADVFYMIQILMKFRTAYVAPSSRVFGRGELVIDTSKIATRYLRKGFWLDFIAALPLPQVLIWIVIPNLGGSTMANTKNVLRFIIIFQYLPRLFLIFPLSSQIVKATGVVTETAWAGAAYNLVLYMLASHFLGASWYLLSIERQEACWRSVCDMEQSCQYGFFDCRRIEDSFRVSWFIASNITILCSPKANFYQFGIYGDAVTSQVTTSSFFHKYFFCLWWGLRNLSSLGQGLLTSTLVGEIMFAIVVATLGLVLFALLIGNMQTYLQSTTVRLEEWRVRRTDTEQWMHHRQLPPELRQSVRKYNQYKWLATRGVDEEALLEGLPADLRRDIKRHLCLELVRRVPLFDQMDERMLDAICERLKPALCTENTYLVREGDPVNETLFIIRGHLDSYTTNGGRTGFFNSCRIGPGDFCGEELLTWALGPRPSFILPSSTRTVKAISEVEAFALIAEDLKFVASQFRRLHSKQLRHKFRFYSHQWRTWAACFIQAAWRRYKKRKEAAELRALSYFQSMGEGEGEAMMTRKGIVHHAHSGMDSDGVVNSLQKPEEPDFSVGE 734
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst11g01340 734 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 15-RELATED-RELATED 105 730 - -
Spst11g01340 734 FunFam Cyclic nucleotide-gated ion channel 1 450 514 - -
Spst11g01340 734 PRINTS EAG/ELK/ERG potassium channel family signature 436 445 IPR003938 GO:0005249|GO:0006813|GO:0016020
Spst11g01340 734 PRINTS EAG/ELK/ERG potassium channel family signature 392 409 IPR003938 GO:0005249|GO:0006813|GO:0016020
Spst11g01340 734 PRINTS EAG/ELK/ERG potassium channel family signature 187 196 IPR003938 GO:0005249|GO:0006813|GO:0016020
Spst11g01340 734 PRINTS EAG/ELK/ERG potassium channel family signature 486 493 IPR003938 GO:0005249|GO:0006813|GO:0016020
Spst11g01340 734 PRINTS EAG/ELK/ERG potassium channel family signature 304 314 IPR003938 GO:0005249|GO:0006813|GO:0016020
Spst11g01340 734 PRINTS EAG/ELK/ERG potassium channel family signature 418 429 IPR003938 GO:0005249|GO:0006813|GO:0016020
Spst11g01340 734 Gene3D - 136 447 - -
Spst11g01340 734 CDD CAP_ED 523 654 IPR000595 -
Spst11g01340 734 SUPERFAMILY cAMP-binding domain-like 453 649 IPR018490 -
Spst11g01340 734 ProSiteProfiles cAMP/cGMP binding motif profile. 523 620 IPR000595 -
Spst11g01340 734 FunFam Cyclic nucleotide-gated ion channel 1 521 639 - -
Spst11g01340 734 SUPERFAMILY Voltage-gated potassium channels 123 445 - -
Spst11g01340 734 Gene3D Helix hairpin bin 450 514 - -
Spst11g01340 734 MobiDBLite consensus disorder prediction 714 734 - -
Spst11g01340 734 Gene3D Jelly Rolls 521 641 IPR014710 -
Spst11g01340 734 Pfam Ion transport protein 132 450 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
Spst11g01340 734 MobiDBLite consensus disorder prediction 70 90 - -
Spst11g01340 734 SMART cnmp_10 523 654 IPR000595 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst11g01340 Spst-Chr11 37913893 37919361 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst11g01340 98 731 Ion Channels AT2G28260 77.008 0.0 1013
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst11g01340 K05391 - gmx:100791992 1239.17
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst5g00536 5 4334869 4338142 Spst11g01340 11 37913893 37919361 PCT