Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst11g01337 ATGAAGCCACAGCTCAAGATTGCTCTTGCTTTAGTTATTAGCTTGCTTTGGATTCAGCACTCAATTTGTGATGAAGCTTCTGATAAATCTAACCTGAACAAGTGGAGATGTAGATGTTCTTTTGGAGGGAATCATAGCTACGCTCTGGCTAATTGTTCTAAGTCATGTGATTGCCACTCAGATGCTGAAGAGAGTGCATCCATATGGACATGCATATGTGATTCCAATGGGTTTCCCCAAGTGGCAGCAGATGATCATAGCCCTAATTGCTTTAACGCTTGCAACTGCACTTGGGGAACTGTCAGCAATCCTGGAGGTTCAAAGAAACATGTTTCCATCAAGATTGTTGTAGTTATCCTATCAATATGTGTTATATGCACAACTACGGCATTTCTTGTCTCACTTATATGCCATATATACCGAAAGGACCGATGTACTATTCAATCACCAATTTTCTCAACTGATAAGGAGACAAGTAGTGGTAGTACCACCAACTTAATTAGTTATAGGTCTGGAGCTTCTTCGGTGCCAGAAACAAAATATGCAATAAATTCTCCAATTTGGTATATTACAGGATGCTTTCAGAAAGCCTCTTTCTTATTTGGGAGCCCAAAAGAAACTTACTACGGAAATATTTTTCCATTTTCGTTAGCTGAACTGGAAAATGCCACTGAAAACTTTTCATCTTCCAAACTAATTGGACTAGGCGGAAGCAGTTATGTATACCATGGTAGGCTGAAAGATGGTAGCCATGTGGCAGTTAAACGACTAAAAGATCAAGGAGGGCCAGAAGCAGACTCTGCATTTTTCAAGGAGATTGAACTATTATCTAGACTTCATCATTGTCATTTGGTGCCTTTGCTTGGATACTGTTCAGAGTTAAAAGGAAAACATGTTCAGAGGTTACTAGTATTTGACTACATGGCTAATGGAAATTTGAGGGACTGTTTAGATGGAGTTTCTGGAAAACATATAGATTGGGCTACTCGTGTAATGATTGCAATAGGAGCTGCAAGGGGCTTGGAGTATCTCCATGAAGCAGCTGCTCCAAGAATTCTTCATAGAGATGTCAAATCAACTAACATTCTTCTGGATGAAAATTGGCAAGCAAAAATAACTGATCTTGGCATGGCTAAAAACCTGAGATCTGATGACCTCCCCAGCTGTTCAAATTCTCCAGCAAGAATGCAGGGTACATTTGGCTATTTTGCACCTGAGTATGCCATTGTTGGTAGAGCTTCTCTTGAGTCAGATGTCTTTAGTTTTGGTGTGGTTCTTCTTGAGCTTATCAGTGGTCGGCAGCCCATCCATAAATCTACAGGCAAAGAAGAAAGCCTTGTTATATGGGCTACTCCTCGCTTACAGGATAGTAGACGAGTAATAACGGAGCTGGTTGATCCACAATTAAAAGGAAATTTCCCAGAAGAAGAGGTGCAGGTGATGGCATACTTAGCAAAGGAGTGTTTGCTGCTGGATCCTGACACTCGACCAACCATGAGTGAGGTTGTTCAGATTCTTTTAAGTATTTCCCCGGGAAAATCTAGGAGGAGAAGAAACATTCCAGCCAGCCTCTTTCAGGAACCACGGGAAGTAGAAAAGCAAAGCCAAGCTACACCCATTAAATTTCCAATGCATAGTTCATTGCCAACATATATTGATCATAATCTTTCTGTTGACAACAAAAGTAAAGAAGCAGATGCAGTTTCAGCTGAATATATGGAGAGTTTGATCCTCTTGACTTCACAATCTGATGGCTCTGGCGTATCAGAAGAGGAAATAGTAGACCTAACTGAGCCTAGGTTTGAATCGTTTTGCATCACGACTGGCAAAGCTCCCTGA 1839 0.4095 MKPQLKIALALVISLLWIQHSICDEASDKSNLNKWRCRCSFGGNHSYALANCSKSCDCHSDAEESASIWTCICDSNGFPQVAADDHSPNCFNACNCTWGTVSNPGGSKKHVSIKIVVVILSICVICTTTAFLVSLICHIYRKDRCTIQSPIFSTDKETSSGSTTNLISYRSGASSVPETKYAINSPIWYITGCFQKASFLFGSPKETYYGNIFPFSLAELENATENFSSSKLIGLGGSSYVYHGRLKDGSHVAVKRLKDQGGPEADSAFFKEIELLSRLHHCHLVPLLGYCSELKGKHVQRLLVFDYMANGNLRDCLDGVSGKHIDWATRVMIAIGAARGLEYLHEAAAPRILHRDVKSTNILLDENWQAKITDLGMAKNLRSDDLPSCSNSPARMQGTFGYFAPEYAIVGRASLESDVFSFGVVLLELISGRQPIHKSTGKEESLVIWATPRLQDSRRVITELVDPQLKGNFPEEEVQVMAYLAKECLLLDPDTRPTMSEVVQILLSISPGKSRRRRNIPASLFQEPREVEKQSQATPIKFPMHSSLPTYIDHNLSVDNKSKEADAVSAEYMESLILLTSQSDGSGVSEEEIVDLTEPRFESFCITTGKAP 612
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst11g01337 612 ProSiteProfiles Protein kinase domain profile. 227 507 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst11g01337 612 FunFam receptor-like serine/threonine-protein kinase NCRK 201 307 - -
Spst11g01337 612 ProSitePatterns Protein kinases ATP-binding region signature. 233 255 IPR017441 GO:0005524
Spst11g01337 612 SMART serkin_6 227 507 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst11g01337 612 FunFam receptor-like serine/threonine-protein kinase NCRK 308 518 - -
Spst11g01337 612 SUPERFAMILY Protein kinase-like (PK-like) 207 506 IPR011009 -
Spst11g01337 612 ProSitePatterns Serine/Threonine protein kinases active-site signature. 352 364 IPR008271 GO:0004672|GO:0006468
Spst11g01337 612 PANTHER OS01G0750732 PROTEIN 32 525 - -
Spst11g01337 612 Gene3D Phosphorylase Kinase; domain 1 202 307 - -
Spst11g01337 612 CDD STKc_IRAK 233 509 - -
Spst11g01337 612 Pfam Protein kinase domain 228 504 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst11g01337 612 Gene3D Transferase(Phosphotransferase) domain 1 308 523 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst11g01337 Spst-Chr11 37887297 37891970 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst11g01337 1 610 Receptor kinase-like Gene Family AT2G28250 50.732 0.0 567
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-XVI Spst11g01337 Pkinase 5.7e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst11g01337 - - gmx:100817870 1108.59