Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst11g01332 ATGGGAAGTTTTGTACTTGTCCACAAAATTATGTTTCGTCTTTGGTTTGTTGCTTGGATGTTCTTGGGTCTGTGCTCTGCTTACGACCAAAATAATTGTACTTCAAATGAAACTGGGCTAGCGACAAGGTACAGTTGCAAGTCAACGCAGGATTCATGTGAAACATTCTTGGTTTACAGAGCTAACAACTATTTCAATACCATTTCCAAAGTCTCGAAGCTCTTCAACAAGAGCTCTGATGAGGTGCTTCTAAAGAACAACCTCACATCTTCCTCTTTGTCTCTTGAGCTCAAACAGGGTAAGGAGGTGATTATTCCTGTTAACTGCACCTGCTCTGGCAATTATTATCTAACCAATTTAAGCTATGAAGTCCTTAACAACACAACATTTTCGGAAATTGCTTGTGGTGTTTTTGAGGGGCTGCTCAAACATCTCACACTGGCTGAGGAAAACCCTTCACAAGGTAATCAACCAGAAGCTGGTTCTGAGCTTCATGTACCTCTCACATGTGCTTGTCCTCACACCGAGAATTTCACCAGGAGCAAGAAGGTGAAGTACCTTGTCACATACCCTCTTATACAGAATGATGATCCTGACAAAGTGAGTGAAAAATTTGGCATTTCATCTGAAGATATTTATGCTGTTAATAACTTGAATTTGTGGTCGACTGTTTATCCTGAAACAGTTGTTTTAGTTCCATTAATGGATGGTCCGATCAGAATACTTGATATTCCTGATTCTCCTTCTCCACCTCCTGGCTTCCTTCCCACAGTGGTCAAGACACAAGAATCCACACAACCATCAAATTTGTACATTGCAGGATATGTTATTGGATTTTTGTTGTTCATAATATTGCTTGCAAGCGGATTTTACATGAAGAGATTGAAGAAAAGGGATGTTGTCCATTCTTTCAGTCCAACAAACTCCCTCACTTTGTGGTCACCAACTAGAAGCTCTCAGATTTCTACCCAAACGGCTAAAAGCAATACAACTTGGTGCCTGTCCCCAGATCTTCTCATTGGAATAAAGTACTACCTACTCAATTACACCATCGAGGAGCTCCATAAGGGAACCAAGAATTTCAGTCAAGAAAATAACATCTATCGAAATCAGGGTGACTTTGTCTACAAGGGCACAGTCAATAATCTTGAGGTGATGATAAAGAGGATGAGGATGGAAGACACACGCCAGGTGATTGATTTACACTCTAAAATCAACCACATTAATATTGTGAAATTGCTTGGTGTTTGTTATGGTGTGAGCAATGATTCATGGTCTTATTTAGTCTTTGAGTTGCCTAAGAACGGATGCTTAAGGGACTGCTTATCTGATCCATGCAATCCTCTAAATTGGTTCAAAAGGACACAAATAGCCTTTGATATTGCAACATGTCTCTACTATTTACATTGCTGTTCTTTTCCTTCCTATGCTCACATGAATGTCAGTAGTAGAAACATATTCATAACAGCCAACTGGAGGGGTAAACTGGCAGATGTTGGAAGGGCATTGGATTCTAGTGCAACACTCACCAAAAGCAATGATAGTACGGAGATTCCCAAAGGACTGGTGGCACCAGAGCTCCTCTCACATGGCTCAGTTTCTGAAAAGGTTGACATTTTTGCATTTGGGGTTGTATTGCTTGAGCTGATCTCAGGAAGGGACAACTTTGAGGGAAAACCAGTCAAAGATTCCCTTGGATTTTTGTTGGGGGAAGCCAGTGAAGGGGGTTGTTTTGAAGGGTTAAGAAGTTTCGTGGATCCTAATCTGAACGATTACTCTCTTCCTGAGGCTTTATGTTTGTCTTTTCTAGCAAAGAATTGTGTGGCAGATGATCCACTGCATAGGCCAAGTATGGATGATATCATGAAAGTCCTTGCAAAAATGATTTAG 1890 0.4069 MGSFVLVHKIMFRLWFVAWMFLGLCSAYDQNNCTSNETGLATRYSCKSTQDSCETFLVYRANNYFNTISKVSKLFNKSSDEVLLKNNLTSSSLSLELKQGKEVIIPVNCTCSGNYYLTNLSYEVLNNTTFSEIACGVFEGLLKHLTLAEENPSQGNQPEAGSELHVPLTCACPHTENFTRSKKVKYLVTYPLIQNDDPDKVSEKFGISSEDIYAVNNLNLWSTVYPETVVLVPLMDGPIRILDIPDSPSPPPGFLPTVVKTQESTQPSNLYIAGYVIGFLLFIILLASGFYMKRLKKRDVVHSFSPTNSLTLWSPTRSSQISTQTAKSNTTWCLSPDLLIGIKYYLLNYTIEELHKGTKNFSQENNIYRNQGDFVYKGTVNNLEVMIKRMRMEDTRQVIDLHSKINHINIVKLLGVCYGVSNDSWSYLVFELPKNGCLRDCLSDPCNPLNWFKRTQIAFDIATCLYYLHCCSFPSYAHMNVSSRNIFITANWRGKLADVGRALDSSATLTKSNDSTEIPKGLVAPELLSHGSVSEKVDIFAFGVVLLELISGRDNFEGKPVKDSLGFLLGEASEGGCFEGLRSFVDPNLNDYSLPEALCLSFLAKNCVADDPLHRPSMDDIMKVLAKMI 629
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst11g01332 629 ProSiteProfiles Protein kinase domain profile. 361 629 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst11g01332 629 Gene3D Transferase(Phosphotransferase) domain 1 434 629 - -
Spst11g01332 629 Pfam Protein tyrosine and serine/threonine kinase 378 564 IPR001245 GO:0004672|GO:0006468
Spst11g01332 629 Gene3D Phosphorylase Kinase; domain 1 324 431 - -
Spst11g01332 629 SUPERFAMILY Protein kinase-like (PK-like) 343 625 IPR011009 -
Spst11g01332 629 ProSiteProfiles LysM domain profile. 188 232 IPR018392 -
Spst11g01332 629 PANTHER LYSM-DOMAIN RECEPTOR-LIKE KINASE-RELATED 29 628 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst11g01332 Spst-Chr11 37826243 37828132 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst11g01332 10 629 Receptor kinase-like Gene Family AT2G23770 29.147 8.00e-65 222
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LysM Spst11g01332 PK_Tyr_Ser-Thr 2.5e-26 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst11g01332 - - gmx:100818937 1003.05