Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst11g01326 ATGGAAGCATGGCCAAAGCTAGTTTTTGGCCAGGATAGTGGTGGAGGTGGAGGTGGTACTGGTGCTGGCATTGAGATATTTGCCCAAGAAGTATATCGTAGCATGTCCAATTACACATCTGTGTTCAAGAAAGCAATACAAAAAGAGTTGGGCTTTTGCGTTGTTGATGTGGATGCTGATTGGAATGGGGCATTTAATTTCACCAAAGATCTTACCTTTTTGACCATTTGTGCCCAAGAAATGAAAGGAGATATTACCCAACGCATGTGCACAGAAGCAGAAATACTAGCTTATGGTCAAAGTTTCGGTGGTGGGAAGACAGGATCGAGCTTCTTGAAGCCGAACATAAATTGTAATATGAGTGCATGGGTTAATGGTTGTGAACCCGGATGGGGTTGTAAAGCTAATCAGAAAGTAAATATTGACAGTACCAAGAAGGAAATACCTGTTAGATCTGTTGATTGCCAACCTTGTTGTGAAGGTTTCTTTTGCCCTCGTGGTCTCACTTGCATGATACGTGAATGCATCCTGATTTGGTCCGATCGAAGCGAGTATGATGAGGCTCGTATTGTCCGCGTGGAGAACTCAATAAAACTAGTGGAGTCTGTGAACCATATCGTTATCAGCTACCTCCTGGAAAATCTACCCATACTTGTGGTGGGGCAGATATTTGGGCTGATATTACGAGTAGCAGTGAGAACAGGTTCTACTTCTCCAGAGCGAAATCTGTATAATGTCAATGCAGTTCTTGCAACTCGAGAAAGAAGGCAAGCAAATACAAGAGAAAGGGCTGCTCAAAGTGTAAGAGAATCACAAGCCCGTGAAAAGTGGAAATCTGCGAAAGATATTGCTAAAAAGCATGCAGTGGGACTACAGTCTCAATTATCACGTACATTTTCACGCAAAACTTCAAAAGGTTTTGGTTCTAAACATTCAGATTCTTCTGGACCAGTTTTTGGTAAAGGCAAGAAAAAAGATAAAAACAATCTCACGAAAATAATAAATGACATTGAGGAAAATCCCGATAATCCAGCGGGATTTAATGTTCAGATAGGAGATAAAAATGTCAAAAAGCAAGCACCGAGAGGCAAGCAATTACATACTCAGAGTCAAATTTTCAAGTATGCGTATGGTCAGATTGAAAAAGAAAAGGCTTTAGCAGAACAAAACAAAAACTTGACCTTTTCTGGAGTAATTTCAATGGCTAGTGATATTGAGGTTAGGAAGAGACCTACCATTGAGGTTGCTTTTAAAGATTTAACCCTCACTTTGAAAGGGAAAAACAAACATTTATTGAGGTGTGTGACTGGTAAACTCTATCCTGGTAGAGTTTCAGCAGTCATGGGTCCATCTGGGGCTGGTAAGACAACATTTCTTTCTGCTTTAACTGGAAAAGCAACTGGATGTCATACAACTGGGCAAATTCATATAAATGGTCAGGAATCTTCTATCAGGTCATACAAGAAAATCATTGGGTTTGTGCCACAAGATGATATTGTGCATGGCAATTTGACAGTGGAGGAGAATTTATGGTTCAGTGCTAGATGCAGACTCTCTGCTGATCTACCAAAAGAAGAAAAGGTGTTAGTGGTTGAAAGAGTCATTGAGTCATTAGGTCTACAGGCAATACGAGATTCTTTAGTTGGGACAGTGGAGAAACGAGGAATCTCTGGAGGTCAAAGGAAAAGAGTAAACGTTGGATTGGAAATGGTCATGGAACCTTCCCTTCTAATTTTGGATGAACCCACATCTGGTTTGGATAGTTCATCTTCTCAATTACTTCTTAGAGCACTTAGACGTGAAGCTCTTGAAGGAGTAAACATATGTATGGTCCTTCACCAACCGAGGTAA 1851 0.4063 MEAWPKLVFGQDSGGGGGGTGAGIEIFAQEVYRSMSNYTSVFKKAIQKELGFCVVDVDADWNGAFNFTKDLTFLTICAQEMKGDITQRMCTEAEILAYGQSFGGGKTGSSFLKPNINCNMSAWVNGCEPGWGCKANQKVNIDSTKKEIPVRSVDCQPCCEGFFCPRGLTCMIRECILIWSDRSEYDEARIVRVENSIKLVESVNHIVISYLLENLPILVVGQIFGLILRVAVRTGSTSPERNLYNVNAVLATRERRQANTRERAAQSVRESQAREKWKSAKDIAKKHAVGLQSQLSRTFSRKTSKGFGSKHSDSSGPVFGKGKKKDKNNLTKIINDIEENPDNPAGFNVQIGDKNVKKQAPRGKQLHTQSQIFKYAYGQIEKEKALAEQNKNLTFSGVISMASDIEVRKRPTIEVAFKDLTLTLKGKNKHLLRCVTGKLYPGRVSAVMGPSGAGKTTFLSALTGKATGCHTTGQIHINGQESSIRSYKKIIGFVPQDDIVHGNLTVEENLWFSARCRLSADLPKEEKVLVVERVIESLGLQAIRDSLVGTVEKRGISGGQRKRVNVGLEMVMEPSLLILDEPTSGLDSSSSQLLLRALRREALEGVNICMVLHQPR 616
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst11g01326 616 FunFam ABC transporter G family member 24 409 616 - -
Spst11g01326 616 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 413 615 IPR027417 -
Spst11g01326 616 Gene3D - 414 616 IPR027417 -
Spst11g01326 616 SMART AAA_5 441 616 IPR003593 GO:0016887
Spst11g01326 616 ProSitePatterns ABC transporters family signature. 556 570 IPR017871 GO:0005524|GO:0016887
Spst11g01326 616 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 415 615 IPR003439 GO:0005524
Spst11g01326 616 MobiDBLite consensus disorder prediction 257 279 - -
Spst11g01326 616 PANTHER ABC TRANSPORTER G FAMILY MEMBER 28 371 616 - -
Spst11g01326 616 MobiDBLite consensus disorder prediction 300 325 - -
Spst11g01326 616 Pfam ABC transporter 435 584 IPR003439 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst11g01326 Spst-Chr11 37763167 37771757 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst11g01326 404 614 Calmodulin-binding Proteins AT2G36910 25.926 3.90e-13 70.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst11g01326 - - csin:114257021 682.559