Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst11g01325 ATGGATTCTAATACCCCTGCTCCTCTTAAACCCACCAACACAAAGCTACCATCTCTAAGGGCAAAGAAAGATCGCCACACCAAGGTGAATGGCAGAGAACGACGTGTTCTTCTGCCACCTTTGTGTGCTGCTCGCATCTTCCAACTCACTCGTGAGCTAGGTTACAAGACTCATGGTGAGACCATAGGGTGGCTTCTACGCCAGGCTGAGCCCTCCATTATTGCTTCCACTGGCACTGGGATATCACCTTCCATGGCTGCTGTAACATCATCAACATCACCATCCTCACTACCGTTACCACCACCGCTACCTTCTGAGGACACCAACGTTGTTGTTGGTCTGCATGCAAATTCGGTAGATGTGTCAGTAGACAATGAGATCAATTCAAAAGAGACGTTTCTGCCATTGGATTTTGATGTGTTTTCAAACTTTAATGTGGAGTTTTCTGCTGCTGAGATCGAAATGCTCCAATCATTGATGACGAGGTTGGGCTGA 495 0.4727 MDSNTPAPLKPTNTKLPSLRAKKDRHTKVNGRERRVLLPPLCAARIFQLTRELGYKTHGETIGWLLRQAEPSIIASTGTGISPSMAAVTSSTSPSSLPLPPPLPSEDTNVVVGLHANSVDVSVDNEINSKETFLPLDFDVFSNFNVEFSAAEIEMLQSLMTRLG 164
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst11g01325 164 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 12 126 IPR005333 GO:0003700
Spst11g01325 164 MobiDBLite consensus disorder prediction 1 29 - -
Spst11g01325 164 Pfam TCP family transcription factor 21 93 IPR017887 -
Spst11g01325 164 ProSiteProfiles TCP domain profile. 22 76 IPR017887 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst11g01325 Spst-Chr11 37761724 37762218 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst11g01325 23 97 TCP Transcription Factor Family AT5G08330 63.636 2.12e-28 103
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Spst11g01325 TCP 9.9e-24 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst11g01325 - K16221 var:108322003 243.817
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst5g00526 5 4186593 4187099 Spst11g01325 11 37761724 37762218 PCT