Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst11g01313 ATGGGGGGGCTCAAAGTAAGAAGCAACAGCAAAATAAGGGTTGTGGGTGGTATTTTGAAGTTGAAGGGTGTGTTGGAAAAGCTTCAAAAGAGTGTCTTATTGCGGAGACATAAATCAAGTTCCTATGGTGGAGATTATGAAGAATTAGGAGATGACAGAAGGTGCGTGGCAGAGGATGTGAAAGAAGGACATTTTGTTGTGATTGCAAAAGATCTTGTGGAGGAGGCAAAGAGATTGGTGGTTCCATTGAGCTGTTTAAACAATCCAACATTCTTGAAGCTATTGGAGGAAGCAGAAGAAGAGTATGGATTTGATCAACATGGTGCACTAACCATTCCTTGCAGGCCTTGTGAACTGGAGATGCTGTTGGCTCAGCAATGGAAAGAAAGAGAGGGATCCTGA 402 0.4303 MGGLKVRSNSKIRVVGGILKLKGVLEKLQKSVLLRRHKSSSYGGDYEELGDDRRCVAEDVKEGHFVVIAKDLVEEAKRLVVPLSCLNNPTFLKLLEEAEEEYGFDQHGALTIPCRPCELEMLLAQQWKEREGS 133
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst11g01313 133 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 41 121 IPR003676 GO:0009733
Spst11g01313 133 Pfam Auxin responsive protein 41 123 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst11g01313 Spst-Chr11 37553369 37553770 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst11g01313 15 124 Calmodulin-binding Proteins AT4G34750 31.818 2.56e-11 55.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst11g01313 K14488 - vum:124826917 197.208
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst11g01313 11 37553369 37553770 Spst11g01313 11 37553369 37553770 ECH
Spst5g00516 5 4121547 4121954 Spst11g01313 11 37553369 37553770 PCT