Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst11g01293 ATGACCACCATACCCGCCGACAACAGTAGCAGGAGATTTAGTGTTGTCAAGTTCGTAGCACAAGTAATAAAAGGTCGATGGTTTATGCTGTGTGCCTCTTTCTTTATCATGGGAGGATCTGGTGGTAGCTATGTATTTGGATCATACTCTGAAGTAATCAAATCTACTCAAGGTTATGATCAAAGCACACTCAACCTTTTGGGGTTCTTCAAGGACCTTGGTGGAAATTTTGGTGCTCCTATTGGTCTCATTGGAGAGATTACCCCTCCATGGTTGGTACTCCTTCTAGGCTCATGCCTTAACTTTGCTGGCTATTTCATGATTTGGCTTGTGGTCACTGGCAAAATATCAAAGCCACATGTTTGGCAGGTTTGTCTTTACATCGCAATTGGTGTCAGTTCTCAAAACTTTGCCAACACTGGAGTAATAACCACTTGTGTAAAAAACTTTCCAGAAAGTAGGGGCACAATATTAGGTTTGTTGAAAGGTTACCTTGGTCTCAGTGGAGCCATTGTAACACAACTTTACCTGGCCATTTATGGGAATGATTCTGAGTCTCTCATCCTTCTCATTGCATGGCTCCCTGCTGCTATACCAGCAATATTTGCATGTGTAATTCGATTCATGAAGGTTGAAACTAGGCAACCCAATGAGGGAAAGTTAATCAACCAATTTTTATTTGCATCAATTGCACTTGCAATATTCATCATGGTAATGATCATTGTTCAGAAACAGACTGTTTTTTCTAAAGCAGCTTATGCTGGGAGTGCAACTCTGGTATGTATTCTTCTGATCCTCCCTTTGTTTATTACTATCAGACAAGAGTTATCATTGTGGAACAGCAAGGAAAAACTTGCACGTACTATAAATGGGGTGGTCATAGAGAAACCACAAATAGTTGAACCTGCAGAATCACCACCCCCTCCAAAAGAAAAAGCCATAGACCCAAATATGTCTTGGTTTGCCAACATATTCAACAAACCTGAAAGAGGAGAGGATCACACCATTCTACAAGCACTTATCAGTATTGACATGTTGTTATTGTTGATTTCGTCATTTGCTGGCTATGGAACAAACGTAACAGTGGTGGACAATTTGGGACAAATTAGCAAGTCACTAGGATACACTGGAAATACAGTAAAATCATTTGTGTCACTAGTAAGCATTTGGAATTACTTTGGGAGGGTCCTGTCTGGTTTTGGATCAGAAATTTTGCTTCGAAAGTACAAAGTTCCTCGTCCCATGTTGTTGGCCTTTTCTCATTTCCTTACATGCATTGGACACCTTCTTATTGTGTTCCCAACACCCGGTTCGGTCTATTTTGCATCAGTGATAATTGGATTCGCTTTTGGCGTATTATTGCCAATGCTCTATGCACTTGTTTCTGAACTCTTTGGTCTTAAATATTTTTCCACCCTGCAAAATTGTGTCCTCATGGTTATTCCTATTGGATCATATGTGTTGAATGTTAGGGTGACTGGCTTCCTTTATGATCGAGAGGCAAAAAATCAACTCAGAAAAAGTGGCAAAGAGTGGATGAAAGGCACAGAGTTGACATGCATTGGAATTGAATGTTATAAGCACTCTTTGATGATAATGGCATGCATCTCTTTCTTCGCAGGGTTAACTTCTTTGATTTTTGTGATGAGGACCAAAAAGTTTTATAAAAGTGACATATACAAAAAATTTGCAAAGGATGCAGTAGCTGCAGAAACGGAATTGACTACTACATCCTGA 1737 0.3984 MTTIPADNSSRRFSVVKFVAQVIKGRWFMLCASFFIMGGSGGSYVFGSYSEVIKSTQGYDQSTLNLLGFFKDLGGNFGAPIGLIGEITPPWLVLLLGSCLNFAGYFMIWLVVTGKISKPHVWQVCLYIAIGVSSQNFANTGVITTCVKNFPESRGTILGLLKGYLGLSGAIVTQLYLAIYGNDSESLILLIAWLPAAIPAIFACVIRFMKVETRQPNEGKLINQFLFASIALAIFIMVMIIVQKQTVFSKAAYAGSATLVCILLILPLFITIRQELSLWNSKEKLARTINGVVIEKPQIVEPAESPPPPKEKAIDPNMSWFANIFNKPERGEDHTILQALISIDMLLLLISSFAGYGTNVTVVDNLGQISKSLGYTGNTVKSFVSLVSIWNYFGRVLSGFGSEILLRKYKVPRPMLLAFSHFLTCIGHLLIVFPTPGSVYFASVIIGFAFGVLLPMLYALVSELFGLKYFSTLQNCVLMVIPIGSYVLNVRVTGFLYDREAKNQLRKSGKEWMKGTELTCIGIECYKHSLMIMACISFFAGLTSLIFVMRTKKFYKSDIYKKFAKDAVAAETELTTTS 578
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst11g01293 578 CDD MFS_Mch1p_like 25 540 - -
Spst11g01293 578 SUPERFAMILY MFS general substrate transporter 16 215 IPR036259 -
Spst11g01293 578 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 27 558 - -
Spst11g01293 578 SUPERFAMILY MFS general substrate transporter 228 554 IPR036259 -
Spst11g01293 578 Gene3D MFS general substrate transporter like domains 339 557 IPR036259 -
Spst11g01293 578 Pfam Nodulin-like 26 272 IPR010658 -
Spst11g01293 578 Gene3D Multidrug resistance protein D 2 207 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst11g01293 Spst-Chr11 37342355 37344091 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst11g01293 16 578 Nodulin-like Gene Family AT2G28120 57.447 0.0 659
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst11g01293 - - gmx:100799928 855.129