Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst11g01282 ATGGCCGCGGTGGCGGAAGCACCAACCCTGTGCCGCCTAAATCTCTCGAAAAACAGAGAAAGTTTGTTTTTGTCCACCGTCGTTACAAAGAGAGAAGAGGCAAATGTCCTCCACACTCAAGATGGCATCACTATTGTTTTCCGTGGTTTCATGAACACCTCTCGTTCATCTCAAAATGGCGTCCCTTTAGAGGTTTGTCAACACTTCCTGGTTGGATTTCCGCATGATTGGAACAAGTATGCACCTCATAGTTATGGTGACTCAAGTGCTTCTTCAGTTGATAACATGGAATGTGAAAATAGCAATACAGCAGGTCTTAACATGTGCAATAGTGAAAAAGGAATCTCAGTTCAAAGAGAAGGAAATGGTGGATACTTGATTGGTACAGACCCTTCTGAAAAAGACACGGTGAAACCTCCATCATCCACCAAGAAAGTGAAACCTATCAGACAAAAGATAGTTTTGGATGCCAGCAATTCATTTAGTAGGATGGTTACGAGAAGCATTTCCAAAAAAATGTTGCACAATGCCAAAAAAACATGA 543 0.4199 MAAVAEAPTLCRLNLSKNRESLFLSTVVTKREEANVLHTQDGITIVFRGFMNTSRSSQNGVPLEVCQHFLVGFPHDWNKYAPHSYGDSSASSVDNMECENSNTAGLNMCNSEKGISVQREGNGGYLIGTDPSEKDTVKPPSSTKKVKPIRQKIVLDASNSFSRMVTRSISKKMLHNAKKT 180
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst11g01282 180 PANTHER KINETOCHORE-ASSOCIATED PROTEIN KNL-2 HOMOLOG 19 101 - -
Spst11g01282 180 MobiDBLite consensus disorder prediction 120 150 - -
Spst11g01282 180 Pfam SANTA (SANT Associated) 17 80 IPR015216 -
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Spst11g01282 SANTA 1.3e-16 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst11g01282 - - pvu:PHAVU_011G086100g 177.948