Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst11g01269 ATGGCTGTTGCTGGTCTACGCAGTGTGTCTGTGCTCGACTCTCCTTTCCTCAGGGACTCCCATACCCAGTCGTCTAGGAGAGGGGGTGAGGGGAGACAAGGAAGCACCCGGTCATCTCCACTCTTGCAAATGTGGCGAGAGATTGAAGATGAACATGTGGTGAATCAAGTTCAAGGAAGACCCGGTGAAGTACCTCTTGAGCAAAGGAGGGATGAATTGAGTGGGGAGCTTTCACAGGAAGATAGACCTGATATCCGAGAGCGAGGGCATATACATGTTTTAGAAGATGCAGTTTTAGGTGAGAATGAATCTGAAACATGGTCACAGTCGCAAAGTCAGAATGAATCCCATGATGATCACGAGGATTTAAATAATTCTAGCTGTGAAAATTCTAGTGATTTGGGAGAAGTTGAAAGGGAAAGAGTGAGGCAAATTTTCAGGGAGTGGATGAACAGTGGTGCCAGGGATCATGTATCAAATGTATCCAGAAGAAATAATGGTTCAAGGAGAGAATGGCTTGGGGAAACTGAACAGGAAAGGGTCAGAATTATTAGGGAGTGGGTACAAATGAGTAGCCAGCAGAGAAGTGTTTTGTCTGGGGAAAACAGGGAAGTACAATCTACTGAAATTGGTACACAAATTGAACGTGTACGTGATGGACTCATTGTCAACCAGACACGGGGCCAAAACGAGCATACACGGAGGGGCATTCGTAAATTATGTGGCCGACAGGCTATGCTTGATATGCTTAAGAAGGCTGAAAGAGAACGGCAAAGAGAAATTGAGGGCTTGTGGATCCATCGGGCCGTATCTCAATTCCCCTATCGTAATCGCATTCAGGCACTGCTTAGAGGCAGATTCTTGAGAAATGATAGACCTGTTGATAATAACAGGCCCCTTTCTGTTGCAGAAAGCGAGTTGGGCTTTTTGAGGCGGAAACAAACTGTATCAGGTCTAAGGGAGGGATTTTTCGCTAGAAAGGAGAATAGTAGTTGCAGTCAAGCAACCAGCAATGTATCTGATACCTCGTCCAATGTTGATATTGATTTTAATACTAATGAACAAATGGGATCAACCAGTTCACATTTGGCCCCAACTGTACATTCTGAACAGTCAGACCCTAATGACAGAGGAAACGATGGATTTGTGGTATCGAGCAGCCAGAGCTGTGAACAAGGTACCATATCTGAGAATTTAAATAAAAAAGAATATACTGCACAAATAGGAGATCTATTGCAGCATTTGCCAATTGAATCACTAGATTGTCAGTCATCATTCAGTGCCAGTGTTGAAAGAGTGAACAACACTGAGCAAAATGTTGATGTGATGGCAACTGAATATAGCGCCAATGAAATTACCCAACAAAGTTCACGAATTGAAGATTCAGAGCATCGTAATAACCAGGAATTCAGTGAGGTGTATAACGAGCATTATGAGCTGGGTGATAATTATGACATTCGTACAGAGGGTAATGTTGCTGATGATGTAAATTGGAATGAATCTGGCGCTCTAGAACTAGAACAGGTAGAAGAAGCTTTTGAGAATGAAGGAAGTGAGTGGTATCAAAATAATACCGAATGGAGAAATAGCACCGATGAAAATGTGAATGATAATCAGCCCAGTAATACAGCAAATGAGTGGCCTGAAAACACATTGGGAAATGGAGATGGAGAAAACTCTCATCTGCAAGAATCTCATGAAGCATGGCATGAAGATGGTGGCTTCCAAGAGGCTGTGGAAAATTGGTTGGGAGGACCTTCTGATCATGAAAGTGCTCCAGTTGGTAGAATTCGAGGATTTTATTTTCCTGAAGATGACAATGTGTACAGTGTTGAACTCAGGGAACTTCTTAATAGGAGAAGTGTCTCTAACCTCCTTCACAGCAGTTTCCGGGAGAATCTTGATCAGTTAATACAATCATATGTTGAAAGGCAGGGCCATGCTCACATTGACTGGGAGTTGCAAGAAACAACCCCCTCATCTGACTCAGTAGAGCAGGACCTTGTGCAGCAGAGTAGGGATCAAATTGTTGATCAGGAGGGTCCTGTTAATAGTCCACTTGATCTGCCATCTTTACCTATACCGCCTCCTCTACCTCTATGGGACCAGCAGCACCACCGGGACAACTGGTCACAGAATGACATAAATAATCAGCGTCTAGGAATTGATTGGGAGATTGTTAATGACTTGAGAATTGACATGGCTCGATTGCAACAAAGGATGAATAACATGCAGAGAATGCTCGAGGCTTGTATGGATATGCAGCTTGAGTTGCAGCGCTCCATAAGACAGGAAGTTTCTGCGGCCCTAAATCGCTCTGCTGATTCATCAGGAATACCTGATTGCGAGTCACCAGAAGATAAATCTAAATGGGAATGTGTGAGAAAAGGTCTTTGCTGTGTATGCTGCGAAAGCAATATCGATTCTTTGTTGTACAGGTAA 2442 0.4345 MAVAGLRSVSVLDSPFLRDSHTQSSRRGGEGRQGSTRSSPLLQMWREIEDEHVVNQVQGRPGEVPLEQRRDELSGELSQEDRPDIRERGHIHVLEDAVLGENESETWSQSQSQNESHDDHEDLNNSSCENSSDLGEVERERVRQIFREWMNSGARDHVSNVSRRNNGSRREWLGETEQERVRIIREWVQMSSQQRSVLSGENREVQSTEIGTQIERVRDGLIVNQTRGQNEHTRRGIRKLCGRQAMLDMLKKAERERQREIEGLWIHRAVSQFPYRNRIQALLRGRFLRNDRPVDNNRPLSVAESELGFLRRKQTVSGLREGFFARKENSSCSQATSNVSDTSSNVDIDFNTNEQMGSTSSHLAPTVHSEQSDPNDRGNDGFVVSSSQSCEQGTISENLNKKEYTAQIGDLLQHLPIESLDCQSSFSASVERVNNTEQNVDVMATEYSANEITQQSSRIEDSEHRNNQEFSEVYNEHYELGDNYDIRTEGNVADDVNWNESGALELEQVEEAFENEGSEWYQNNTEWRNSTDENVNDNQPSNTANEWPENTLGNGDGENSHLQESHEAWHEDGGFQEAVENWLGGPSDHESAPVGRIRGFYFPEDDNVYSVELRELLNRRSVSNLLHSSFRENLDQLIQSYVERQGHAHIDWELQETTPSSDSVEQDLVQQSRDQIVDQEGPVNSPLDLPSLPIPPPLPLWDQQHHRDNWSQNDINNQRLGIDWEIVNDLRIDMARLQQRMNNMQRMLEACMDMQLELQRSIRQEVSAALNRSADSSGIPDCESPEDKSKWECVRKGLCCVCCESNIDSLLYR 813
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst11g01269 813 PANTHER RING/U-BOX SUPERFAMILY PROTEIN 1 813 - -
Spst11g01269 813 MobiDBLite consensus disorder prediction 529 569 - -
Spst11g01269 813 MobiDBLite consensus disorder prediction 350 389 - -
Spst11g01269 813 Coils Coil 727 754 - -
Spst11g01269 813 MobiDBLite consensus disorder prediction 529 559 - -
Spst11g01269 813 MobiDBLite consensus disorder prediction 58 136 - -
Spst11g01269 813 MobiDBLite consensus disorder prediction 64 99 - -
Spst11g01269 813 MobiDBLite consensus disorder prediction 17 40 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst11g01269 Spst-Chr11 37171150 37174888 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst11g01269 11 37171150 37174888 Spst11g01269 11 37171150 37174888 ECH
Spst5g00488 5 3876956 3881734 Spst11g01269 11 37171150 37174888 PCT