Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst11g01265 ATGCCACCTTATAATATTCAACACACTCGCTTTGTCCTTTACTTCTTCATCCATTGTTTTGTTGACAAATCTTATGTTACCCTCTCATCTTCCCTCTTTCCCCTCTCTCTGTTGCTTGTGTTTGTTTCTCACCAGGAACTGATGTTGGTGCCTCCGCCATGGCTGGAACAACTGTTGTCCACCACATTCTTCACCATGTGCGAAACTCACATCAACACACCCAGAAACGAATGCAACATGTATTGCCTCGATTGCAAGGACCAAGCATTTTGTTTCTATTGCAAACAATCTTGGCATAAGGATCATCAAGTAATTCAAGTGGGTATTGTATTTTACTTTGTATTATTCATTGTATATATTGCAAGTGTAATGCAGATAAGGAGGTCGTCGTATCATGATGTTGTGCGGGTAGCAGAGATTCAGAAGGTTTTGGATATCAGTGGAGTTCAAACATATGTGATAAACAGTGCTAGAGTTCTTTTCCTGAACGAGAGGCCTCAGAATCAACCAAAAACCAATAATGTGGTTGGTAGTGGAAAAAGCAACTCCCATTTGTGTGAAATTTGCAAAAGGAATCTCTTGGACCCTTTTCGTTTCTGTTCTTTGGGATGCAAGGTTGGTGATCTCTCATTAACTTATTTCCTTTCAGTTGTTCAATTTGCTAAAACATATCTCCATAATAGTCCAATTTTTTGCGAATAA 702 0.3917 MPPYNIQHTRFVLYFFIHCFVDKSYVTLSSSLFPLSLLLVFVSHQELMLVPPPWLEQLLSTTFFTMCETHINTPRNECNMYCLDCKDQAFCFYCKQSWHKDHQVIQVGIVFYFVLFIVYIASVMQIRRSSYHDVVRVAEIQKVLDISGVQTYVINSARVLFLNERPQNQPKTNNVVGSGKSNSHLCEICKRNLLDPFRFCSLGCKVGDLSLTYFLSVVQFAKTYLHNSPIFCE 233
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst11g01265 233 PANTHER PLATZ TRANSCRIPTION FACTOR FAMILY PROTEIN 50 205 - -
Spst11g01265 233 Pfam PLATZ transcription factor 127 206 IPR006734 -
Spst11g01265 233 SUPERFAMILY B-box zinc-binding domain 64 108 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst11g01265 Spst-Chr11 37146583 37147631 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF PLATZ Spst11g01265 PLATZ 2e-31 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst11g01265 - - gmx:100787414 286.189
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst11g01265 11 37146583 37147631 Spst11g01265 11 37146583 37147631 ECH