Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst11g01245 ATGGAGGCACCCGTAGCGAGACGGAGAGGACGTCCGAGGAAGAGGAGAAGAGAGGACGAGGAGAATGAGAGCGAAGCAAAGAGGCAGGCGACTATGGGGACCCGCCCCGTTGCTCTCTTAGGGAGATACGTTTTGAAAGATTTTCCTCGAAGCGGAGTATACCTGGGAAAGGTAGTGTATTACGAATCCGGTCTTTATAGAGTTTGTTACGAGGATGGCGATTCAGAGGACCTCGACAGTACTGAAGTACGCTCCATACTCTTAAAAGAGGGTGAATTCAACTGTGATTTAGTGCAGAGGAAAGAGGTGTTAGAAAAATTGGTGTCAAATAATTGTAGCAAGATCGGAAATGGTTCACAGAAGGGACCAATTGAATCCATTAAGGAGGAATCTAAGAATGAATTGGGTGAACTGAACAATGAGTTGTTGAATGAAAAAGATGAGGAAGGAGATGAGGATGACCATGGGGATGCCAATTCTTCAAGTGATTCTGGCATTGGGCTGGGAATGGATTCTGGTGCTGAAGCTGAGACCCAGCCGCCACCCCCTCAGTTGCCTGTGTCATCAGGAACCGTTGGGGTTCCAGAACATTGTGTCTCATTGGTATTCTCTGTATACGGATTCCTGAGGTCCTTTAGTACACGGTTGTTCCTACAGCCGTTTACTCTGGATGAATTCATTGGTGCCCTGAATTGTCAAGTCGCGAATTCACTATTTGATGCAATTCATCTATCGCTGATAAAAGTTTTGCGGAGGCACCTTGAAGCCCTCTCCACAGAGGGCTCTGAACAAGCTTCAAGATGCCTCAGGTGCAATGAATGGAGCTTGCTGGATCCACTGACATGGCCAGTCTTTCTTATACAATATTTGGTAGTCAGTGGACATGCAAATGCTCATGAATGGAGATCATTTCACGAAGAGATATCCACTGTGGAATATTATGCATTGCCGGTCAGTAGGAAGTTGATGATATTGCAAATTCTCTGTGATGATGTTTTGGAATCTGAGGAGATTATAATTGAAATGAACATTCGAAGAGAATCAGAGGTGGGGATCGATTACGATGCAGAAGATAACCTTCCTTCAGAATTTGAGCTTGGAAGAATCCAGCCAAGATCCACCAATACTTCAGCATGTGAGGATAAAGAAACTACAAAGTTTGTTTCAGCTTCAAATGTTGTGAACCAACCTTGGAACTCTATTTCATATTCCAGAGATACAGAAAGTAATGTAGATGGTGATGTTGATAGGAATGGTGATGAATGTCGCCTCTGTGGCATGGATGGGACCCTGCTTTGTTGTGATGGGTGTCCCTCTGCTTATCATTCAAGGTGTATTGGTGTGTTGAAAAATCATATACCAGAAGGGACATGGTATTGTCCAGAGTGCAAAATAAATATGATGGGGCCAACCATTGCAAAGGGAACATCACTTCGAGGGGCTGAAATATTTGGAAAGGATTTGTATGGGCAACTCTTCATGGGAACTTGCGAACACTTACTTGTGCTGAATATTGGCAGTGCTGAATTGTGTCTTAGATATTACAATCAGAATGACATTCCCAAGGTTCTCCGAGTGCTTTATGAATCCATGCAGCACAGACCAATATACCATGATATTTGCATGGCAGTGCTACAATATTGGAATTTTCCAGAAAGTTTGTTGTTTCATTCTGCTTCAAGTGGAGCAAATGTGAACTCAGGACATAGTAAGAAAGAGGCAAAGCCCTCTACATTTTTACTTCCACCTTTGGGTGAAGGAAATTTGGTGAAGGAAGAGAATCCTTTAACCTCTGTCAATGCAATTTACGATAATATGGTTCCATCTCTTGATACTTCATCAGTTTCCAATCCAAGTCTTGCTCCTCGGTGTAATGGCAATGGTAGCAATAGCGAGTGCCCTACTATGACCACAAAGCTTCCTGAGGACACTAGAATGGAGTCCATCCTCTCAGCTGATTCTGCTTCTGTTTCTGTTAGTTGGCATTCCAACTTGAACCAAGAAAATTTTGTTGATAGGCCAACAGTGGTAGATCCTGCCAAGTGCTCTTCCGTAAATGGTCAATTTAGTGATTATGGCCATGCAAATGGTACAGGGTTGCCTATAAATGTCCCTTTCCAAACCAAAGAAAGCACTCAAGCTGGTTTTGAAAAGTGTGAACGAAATGTAACCAATTGTTTTGTGTACATGGGTTTCTCCTATAAGCCTTTGTCTTACATGAATTCCTATATACATGGTGAATTTGCTGCATCGGCAGCTGCTAAATTTGCACTTCTTTCCTCAGAGGAATCTAGGTCAATGGGCCATGTGTCAGACAATCAGAGGAAAATGGCATCTGGAAACACTTACTTGCAAGCAAAAGCATTTTCATTAACTGCTTCACGTTTCTTTTGGCCAAGTTCTGAGAAGAAGCCTGTGGAGGTTCCAAGAGAAAGGTGTGGCTGGTGCATTTCTTGTAAAGGCCCTGCTTCAAGCAAGAGAGGATGCATGTTAAATCATGCTGCTCTAAGTGCCACAAAGAGTGCTATAAAAATGCTAGCTGGTTTTTCTCCTATAAGAAGTGTGGAAGGAGTACTCCCTAGTATTGCAACTTACATTATATATATGGAGGAATGTTTACGTGGTTTAGTAGTTGGGCCCTTCCTAAGTGTAAGCTATAGAAGGCACTGGCGTCAGCGAGTAGAACAGGCTATGACATTTAGTGCTATCAAGCCACTTTTACTTGAACTTGAGGAGAACATTCGGACGATTTCTTTCTATGGGGACTGGGTTAAGCTGGTGGATGATTGGTTGGTGGAATTTTCCATGGTACAAAGTGCCACATCTACTCTTGGAACAGCACAGAAACGTGCACCAACTGGGAGGCGATACAAGAAGCGGCCAGCTATTGATGAAGCCACAGCTGATGGATGCTCTGAAAACTTTGTGTGGTGGCGTGGCGGAAAAGTCACTAAATTTATATTCCAGAAAGCTATCTTGCCAAAATCCATGGTCAGAAAAGCAGCGCGACAAGGTGGTTCAAGAAAAATTTCTGGCATTTTTTATGCTGATGGCATTGAAGTCCCTAAAAGAAGTAGACAACTCGTTTGGAGAGCTGCTGTACAAATGAGTAGGAATGCATCGCAGCTGGCACTTCAGGTCAGATATCTAGATTTTTATCTCAGATGGAGTGATCTGATTCGTCCCGAGCAGAATATCCAGGATGGGAAAGGTCAAGAGACTGAAGCTTCTGCTTTCAGAAATGCAAATATTTGTGATACTAAACTGGTAGAGGGGAAAAATTGTTATGGGATAGCTTTTGGGAGTCAAAAACATCTTCCTTCACGGGTGATGAAAAATGTTATTGAAATAGAGCAAGGTGAAGAAGGAAAGGAAAAGTATTGGTTTGCTGAAGCCCGGATTCCTCTATATTTGGTGAAAGAGTATGAAGAAGGTAATGGAAACGTGTCATATAATGAAGAGCAGCACTTGAATAATGCATCTGAGTTGCACAGAAAACAGTTGAAAGCTATCTGCAAGGACATATTTTTTTACCTTATATGCAAGAGAGATAAGTTGGATGTGGTGTCATGTACTGTATGTCATATGGTTGTTTTAATTAGGGATGCTACCAAGTGTAATACATGCCAAGGTTATTGTCACGAGGGTTGTTCCATAGGATCCATGGTCTCTGCAAACGAAGTTGAGTACTTGACCACGTGCAAGCACTGTTACCATGCCAGATTACTTGCTCAGCAAGAGAATAGTAATGAATCTCCAACCAGTCCATTACTCTTACGAGGAAGAGAGAATAACTCTGGGACAGTTTTGAAGAGATCAAGGCCTAAAACTCATGATCAAGTACTGAAATCTTCCAAGACAAAGGCTACTAATCCCATGAAACAAGTTACTTCTGTGACGAGTTTAAAAGGAACAAAGGCTAAATATTGTAAACAAGAACCAAATTCTACCAGGACTAATGATAATCATCTTGAAATGCAACAAGTTGCTTCTGTGACCACATCGGAAGGAAAACGCCGTCGCAAAAATTGTTCGTGGGGCATTATATGGAAAAAGAAAAATAACGAAGATACAGACAATGATTTCCTGCTCAGAAACATACTTTTAAAAGGGAGCTCAAACATGCCAGAAGTAAATCCTGTTTGTCACTTGTGCCGAAAGCCATATATGTCTGATGTGATGTATATCTGCTGTGAGACATGCCAAAATTGGTATCATGCCGAAGCTGTTGAACTTGAAGAATCCAAAATTTCTGGTGTGTTGGGCTTCAAATGTTGCAAGTGTCGAAGGATAAAATCACCTGTTTGTCCTTACTCTGATTTGAAGCCCAAGAGACCAGAAGGCAAAAAGTCACGCACAAAAGCAAAGAAAGAACATTCTGGAGCAGATACTGATTCTGGAGCAATTTCTGATGTGAGAGAGTGTGAAGCTGCTACTCCCGTCTTTCCTGTATATGATGATTCGACTGCTTTTTCTGTGGAGGATCCTACTCCTGTCTTTGCTGATGAGGATTCTACTTCTGTCTATCCTGTTGAAGATGATCCTCTTCTTTTCTCTCTCTCAACTGTTGAACTCATAACAGAACCTAATAAGATAGATGGGGATATTGAGTGGAACAGTGTCGCTGGACCAGGGCTTCAGAAACTGCCAGTGAGAAGAAATATTAAGAATGAGGGGGATGATGTTTCTTTTGGAGGTGTACCTTTGAATGCCGAGTTCTCTAACTACGGTGGTGAAGCAGGTAATCTGTCCCAGCCTGTAGAGGAATCTACACCTTTAGAATATGCCTCTGGTGTTGACTTTGACAACAAGCTACTGAATGACTCTGATGATGTAAATTATGATGATTTTATGGATTTTGAACCCCATACCTACTTCTCTGTAACGGAACTGCTGCAGTCAGATGATGGTAGTCAGTTAGAGGGAGTTGATGTGTCTGGGGACTTGTCAGGATATTTGGAAAATTCTAGTACCACCCTTATTCCTGAAGAGTGTGGAGATGTTAAATCAGAACCTACAATTTTCACCGGCAATAGTTGCATGCAATGTTCACAAATGGAACCAGCCCCTGATCTCTGTTGTGAGCTTTGTGGGATTTTGATTCACAGTCAATGTTCGCCTTGGGTTGAATTACCATCTAGGGTTGGAAGTTGGAGAATGCTTGGCTATGCGACCTTGGCGGCAAATGATGAGATGTGTGGCTTTCGGTCATGGTCTGGAATCATATGGAATTTAGGCGGATTTTGTTCCCTTCTTGTGGAATTGTTCTTACCATTTCAGTCAACAGGAAAATGCTCTGAACTCAGAGATAAGCAATATTTTTTTACAATGCTTCTCTGA 5340 0.4217 MEAPVARRRGRPRKRRREDEENESEAKRQATMGTRPVALLGRYVLKDFPRSGVYLGKVVYYESGLYRVCYEDGDSEDLDSTEVRSILLKEGEFNCDLVQRKEVLEKLVSNNCSKIGNGSQKGPIESIKEESKNELGELNNELLNEKDEEGDEDDHGDANSSSDSGIGLGMDSGAEAETQPPPPQLPVSSGTVGVPEHCVSLVFSVYGFLRSFSTRLFLQPFTLDEFIGALNCQVANSLFDAIHLSLIKVLRRHLEALSTEGSEQASRCLRCNEWSLLDPLTWPVFLIQYLVVSGHANAHEWRSFHEEISTVEYYALPVSRKLMILQILCDDVLESEEIIIEMNIRRESEVGIDYDAEDNLPSEFELGRIQPRSTNTSACEDKETTKFVSASNVVNQPWNSISYSRDTESNVDGDVDRNGDECRLCGMDGTLLCCDGCPSAYHSRCIGVLKNHIPEGTWYCPECKINMMGPTIAKGTSLRGAEIFGKDLYGQLFMGTCEHLLVLNIGSAELCLRYYNQNDIPKVLRVLYESMQHRPIYHDICMAVLQYWNFPESLLFHSASSGANVNSGHSKKEAKPSTFLLPPLGEGNLVKEENPLTSVNAIYDNMVPSLDTSSVSNPSLAPRCNGNGSNSECPTMTTKLPEDTRMESILSADSASVSVSWHSNLNQENFVDRPTVVDPAKCSSVNGQFSDYGHANGTGLPINVPFQTKESTQAGFEKCERNVTNCFVYMGFSYKPLSYMNSYIHGEFAASAAAKFALLSSEESRSMGHVSDNQRKMASGNTYLQAKAFSLTASRFFWPSSEKKPVEVPRERCGWCISCKGPASSKRGCMLNHAALSATKSAIKMLAGFSPIRSVEGVLPSIATYIIYMEECLRGLVVGPFLSVSYRRHWRQRVEQAMTFSAIKPLLLELEENIRTISFYGDWVKLVDDWLVEFSMVQSATSTLGTAQKRAPTGRRYKKRPAIDEATADGCSENFVWWRGGKVTKFIFQKAILPKSMVRKAARQGGSRKISGIFYADGIEVPKRSRQLVWRAAVQMSRNASQLALQVRYLDFYLRWSDLIRPEQNIQDGKGQETEASAFRNANICDTKLVEGKNCYGIAFGSQKHLPSRVMKNVIEIEQGEEGKEKYWFAEARIPLYLVKEYEEGNGNVSYNEEQHLNNASELHRKQLKAICKDIFFYLICKRDKLDVVSCTVCHMVVLIRDATKCNTCQGYCHEGCSIGSMVSANEVEYLTTCKHCYHARLLAQQENSNESPTSPLLLRGRENNSGTVLKRSRPKTHDQVLKSSKTKATNPMKQVTSVTSLKGTKAKYCKQEPNSTRTNDNHLEMQQVASVTTSEGKRRRKNCSWGIIWKKKNNEDTDNDFLLRNILLKGSSNMPEVNPVCHLCRKPYMSDVMYICCETCQNWYHAEAVELEESKISGVLGFKCCKCRRIKSPVCPYSDLKPKRPEGKKSRTKAKKEHSGADTDSGAISDVRECEAATPVFPVYDDSTAFSVEDPTPVFADEDSTSVYPVEDDPLLFSLSTVELITEPNKIDGDIEWNSVAGPGLQKLPVRRNIKNEGDDVSFGGVPLNAEFSNYGGEAGNLSQPVEESTPLEYASGVDFDNKLLNDSDDVNYDDFMDFEPHTYFSVTELLQSDDGSQLEGVDVSGDLSGYLENSSTTLIPEECGDVKSEPTIFTGNSCMQCSQMEPAPDLCCELCGILIHSQCSPWVELPSRVGSWRMLGYATLAANDEMCGFRSWSGIIWNLGGFCSLLVELFLPFQSTGKCSELRDKQYFFTMLL 1779
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst11g01245 1779 MobiDBLite consensus disorder prediction 1442 1464 - -
Spst11g01245 1779 MobiDBLite consensus disorder prediction 1442 1469 - -
Spst11g01245 1779 PANTHER PHD FINGER FAMILY PROTEIN 33 1690 - -
Spst11g01245 1779 ProSiteProfiles 4Fe-4S ferredoxin-type iron-sulfur binding domain profile. 1196 1227 IPR017896 -
Spst11g01245 1779 MobiDBLite consensus disorder prediction 14 28 - -
Spst11g01245 1779 CDD PHD2_CHD_II 422 463 - -
Spst11g01245 1779 SMART testlast3 196 256 IPR018501 -
Spst11g01245 1779 MobiDBLite consensus disorder prediction 1267 1283 - -
Spst11g01245 1779 ProSiteProfiles Zinc finger PHD-type profile. 419 466 IPR019787 -
Spst11g01245 1779 MobiDBLite consensus disorder prediction 147 190 - -
Spst11g01245 1779 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 1376 1435 IPR013083 -
Spst11g01245 1779 CDD Tudor_AtPTM-like 40 88 IPR047365 -
Spst11g01245 1779 ProSiteProfiles DDT domain profile. 196 256 IPR018501 -
Spst11g01245 1779 MobiDBLite consensus disorder prediction 1248 1266 - -
Spst11g01245 1779 Coils Coil 128 152 - -
Spst11g01245 1779 Pfam PHD-finger 422 464 IPR019787 -
Spst11g01245 1779 SMART PHD_3 1381 1429 IPR001965 -
Spst11g01245 1779 SMART PHD_3 1190 1238 IPR001965 -
Spst11g01245 1779 SMART PHD_3 421 464 IPR001965 -
Spst11g01245 1779 MobiDBLite consensus disorder prediction 614 634 - -
Spst11g01245 1779 MobiDBLite consensus disorder prediction 1248 1296 - -
Spst11g01245 1779 MobiDBLite consensus disorder prediction 1 32 - -
Spst11g01245 1779 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 399 470 IPR013083 -
Spst11g01245 1779 SUPERFAMILY FYVE/PHD zinc finger 1376 1435 IPR011011 -
Spst11g01245 1779 Pfam WSTF, HB1, Itc1p, MBD9 motif 1 308 343 IPR028942 -
Spst11g01245 1779 ProSitePatterns Zinc finger PHD-type signature. 422 463 IPR019786 -
Spst11g01245 1779 SUPERFAMILY FYVE/PHD zinc finger 395 465 IPR011011 -
Spst11g01245 1779 Pfam DDT domain 197 253 IPR018501 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst11g01245 Spst-Chr11 36905933 36914683 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst11g01245 286 574 EF-hand Containing Proteins AT5G22760 46.939 1.54e-72 265
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR DDT Spst11g01245 DDT 2.7e-12 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst11g01245 - - gmx:100796377 2410.56
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst5g00473 5 3758542 3765411 Spst11g01245 11 36905933 36914683 PCT