Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst11g01234 ATGAAAGCAACTAGCACTTTCTCAGGTGCAATGAGATTGGAGAAATGTTGCTTCTGTTCTTCTACATTGTCTCCTGGACGTGGAATCCAGATGGTTCGTAATGGTACAAAGGTTTTTCGGTTTTGTAGATTTAAATGTTTCAAAAACTTTAAAAGGAAGAATGACCCTTGGACAGTAAAATGGATAAAAGTACCTAAGGGAGAGCATGCAAAGGATATTATGACACAGATAAAGAAAAACAAGCCCGGGAGATATGACAGGAATTTTGCTGAGAATGTCCTTAAGGCCATTCCAAAGATTGGTAAAAGAGTCAGCAGGGAAGAGAGACATCATAAGAATAGGATGAAAGGCAAGAAGCTGGAACTGCATATGGAGACAGCTAAGGAGTTGGAGCAGAGTATCATCCTGTTTGAAGGTCTATCTGTGCTTCCAAAGGACCCTTCTGTCACTCTATCCAAGATGGAAGTTGCCGTTTCCCAACAGCAATCAAAGAACAATTATACCATGGAAGAGTGA 516 0.405 MKATSTFSGAMRLEKCCFCSSTLSPGRGIQMVRNGTKVFRFCRFKCFKNFKRKNDPWTVKWIKVPKGEHAKDIMTQIKKNKPGRYDRNFAENVLKAIPKIGKRVSREERHHKNRMKGKKLELHMETAKELEQSIILFEGLSVLPKDPSVTLSKMEVAVSQQQSKNNYTMEE 171
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst11g01234 171 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 14 63 - -
Spst11g01234 171 PANTHER 60S RIBOSOMAL PROTEIN L24 11 140 IPR000988 -
Spst11g01234 171 Pfam Ribosomal protein L24e 11 74 IPR000988 -
Spst11g01234 171 CDD Ribosomal_L24e_L24 11 61 IPR000988 -
Spst11g01234 171 SMART 4TRASH 16 54 IPR011017 -
Spst11g01234 171 Gene3D Ribosomal protein L24e 11 78 IPR038630 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst11g01234 Spst-Chr11 36708188 36712235 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst11g01234 11 171 Cytoplasmic Ribosomal Protein Gene Family AT2G44860 46.429 1.60e-42 137
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst11g01234 K02896 - gmx:100793564 192.971