Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst11g01223 ATGGCCTCCTCCGCCTCCGTCGCGGATAGCGAAACAAAGCCATTTTCCGTTATCTTCGTGTGCCTCGGCAACATCTGCAGAAGCCCCGCTGCTGAAGGAGTCTTCACTGACTTAGTCAACAAAAGGAGCCTCAATTCGCTGTTCAAAATCGATTCTGCAGGCACCATCAATTACCACGAGGGAAATGAAGCGGACCCGAGAATGAGGGCAGCCTCAAAGAGGCGTGGGATTCAGATAACTTCTATTTCAAGGCCAATCAAGCCCTCTGATTTCATTGACTTTGACCTCATTCTTGCCATGGACAAGCAGAACAGAGAGGACATATTGGAGGCCTTTAATAAATGGAAAGGAAAACATTCCTTACCATATGATGCACATAAAAAGGTTAAGTTGATGTGCTCATATTGTAAGAAGCATGATGAAAGTGAAGTCCCGGATCCCTATTATGGTGGACCGCAAGGGTTTGAGAAGGTGTTGGATTTGCTAGAAGATGCTTGTGGATCATTACTGGAAACCATTTTGGCCGAAAATAAGCATTGA 540 0.4556 MASSASVADSETKPFSVIFVCLGNICRSPAAEGVFTDLVNKRSLNSLFKIDSAGTINYHEGNEADPRMRAASKRRGIQITSISRPIKPSDFIDFDLILAMDKQNREDILEAFNKWKGKHSLPYDAHKKVKLMCSYCKKHDESEVPDPYYGGPQGFEKVLDLLEDACGSLLETILAENKH 179
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst11g01223 179 SMART LMWPc_2 15 172 IPR023485 -
Spst11g01223 179 SUPERFAMILY Phosphotyrosine protein phosphatases I 13 173 IPR036196 -
Spst11g01223 179 Pfam Low molecular weight phosphotyrosine protein phosphatase 17 170 IPR023485 -
Spst11g01223 179 Gene3D - 2 178 - -
Spst11g01223 179 FunFam Low molecular weight protein-tyrosine-phosphatase 14 178 - -
Spst11g01223 179 CDD LMWPTP 16 171 - -
Spst11g01223 179 PRINTS LMW phosphotyrosine protein phosphatase signature 144 159 IPR017867 GO:0004725|GO:0006470
Spst11g01223 179 PRINTS LMW phosphotyrosine protein phosphatase signature 17 34 IPR017867 GO:0004725|GO:0006470
Spst11g01223 179 PRINTS LMW phosphotyrosine protein phosphatase signature 60 76 IPR017867 GO:0004725|GO:0006470
Spst11g01223 179 PANTHER LOW MOLECULAR WEIGHT PHOSPHOTYROSINE PROTEIN PHOSPHATASE-RELATED 2 178 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst11g01223 1 177 Protein tyrosine phosphatase (PTP) family AT3G44620 64.500 3.10e-89 260
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst11g01223 K25307 - gmx:100797254 335.109