Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst11g01222 ATGGACACAGAGGATCTAACCGACGACCTTCACAGTCTCAGCTTCGCTTCCACCAACACCACCAAACGCAGCACAAGCTTCAGCTCCGAAACCACCACCGTAACGCCCTCCACATCCTCCCACTTCCTCCACCTGCCACTCCCCAACGGCAAGCCTCACGCGCCCTCCTCCGACCCCTGTGCCTCCTTCATCCACCGCACGCGTCCCCTCGCCCTCTCCCACCTCCGCTTCACGCGCCGCCTCGGCTCCGGCGACATGAGCGCAGTCTATTTGGCGGAGCCCAGGGAAGAAGGCGGCGGCGCTGTGTTCGCGGCGAAGGTGATGGAGAAGGAAGACTTGGCTAGGAGGAACAAGGAAGGGAGGGCGAGGACAGAAAGGGAAATTCTGGAAATGTTGGATCACCCCTTCTTGCCCACGCTCTACGCGTCCATCCACGCGCCCAAATGGCTCTGCTTTCTCACACCCTTCTGCCCCGGCGGTGACTTGCACGTCCTCCGCCAGCGCTTCCCCAACAAACGCTTCCTCGAATCCGCCGTCAGGTTCTACGCATCGGAAGTATTGTTGGCACTTGAATATCTCCACATGTTGGGGATAATCTACCGCGACCTCAAGCCCGAAAACGTGCTGATAAGATCAGACGGCCACATCATGCTCACGGACTTCGACCTGTCACTAAAATGCGACGATTCCACATCAACGGCTCAGATAATATCCGACCAAAACCCCCTTCCCACGCGCAACGACTGCCACGTGGAAGCCGCACGCATGGCGTCCTCCTCCTGCATCATCCCCAACTGCATAGTCCCGACGGCGTCGTGTTTCCACCCAAGACGCAAGCGAAAGAAGAAGCAGAGTCTGCGTAGCGGGCCTGCGTTCGTGGCGGAGCCCATGAACGTTCGGTCCATGTCATTCGTGGGGACCCACGAGTACTTGGCGCCGGAGATCGTGTCCGGGGAGGGCCACGGTAGTGCGGTGGACTGGTGGACTTTGGGGATATTTATGTTCGAACTGTTTTACGGCGTGACACCCTTCAAAGGCATGGACCACGAGCTAACCCTGGCCAACATTGTGGCTCGAGCCCTTGAGTTCCCTAAGGAACCGGCGGGTTCAGGGGCCATGAAGGACCTTATATCGCAGTTGCTGGTTAAGGACCCGGCCAAGAGGCTTGGGTCCGTGATGGGTGCTTCTGCAATCAAGCAGCACTCTTTTTTTCACGGCGTTAATTGGGCCTTGCTTAGGTGCACCACTCCACCCTTTGTTCCCCCGCCTAATACTAAACCTCTCTATCATGATCATCATGAAACTTCTCCTGACATTTTCCTTGATTCTTATTAA 1335 0.5715 MDTEDLTDDLHSLSFASTNTTKRSTSFSSETTTVTPSTSSHFLHLPLPNGKPHAPSSDPCASFIHRTRPLALSHLRFTRRLGSGDMSAVYLAEPREEGGGAVFAAKVMEKEDLARRNKEGRARTEREILEMLDHPFLPTLYASIHAPKWLCFLTPFCPGGDLHVLRQRFPNKRFLESAVRFYASEVLLALEYLHMLGIIYRDLKPENVLIRSDGHIMLTDFDLSLKCDDSTSTAQIISDQNPLPTRNDCHVEAARMASSSCIIPNCIVPTASCFHPRRKRKKKQSLRSGPAFVAEPMNVRSMSFVGTHEYLAPEIVSGEGHGSAVDWWTLGIFMFELFYGVTPFKGMDHELTLANIVARALEFPKEPAGSGAMKDLISQLLVKDPAKRLGSVMGASAIKQHSFFHGVNWALLRCTTPPFVPPPNTKPLYHDHHETSPDIFLDSY 444
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst11g01222 444 ProSitePatterns Protein kinases ATP-binding region signature. 81 106 IPR017441 GO:0005524
Spst11g01222 444 ProSitePatterns Serine/Threonine protein kinases active-site signature. 198 210 IPR008271 GO:0004672|GO:0006468
Spst11g01222 444 ProSiteProfiles AGC-kinase C-terminal domain profile. 405 444 IPR000961 GO:0004674|GO:0005524|GO:0006468
Spst11g01222 444 FunFam serine/threonine-protein kinase D6PK-like 299 422 - -
Spst11g01222 444 Pfam Protein kinase domain 301 404 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst11g01222 444 Pfam Protein kinase domain 78 235 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst11g01222 444 Gene3D Transferase(Phosphotransferase) domain 1 300 422 - -
Spst11g01222 444 Gene3D Transferase(Phosphotransferase) domain 1 161 236 - -
Spst11g01222 444 ProSiteProfiles Protein kinase domain profile. 75 404 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst11g01222 444 SMART serkin_6 75 404 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst11g01222 444 Gene3D Phosphorylase Kinase; domain 1 75 160 - -
Spst11g01222 444 PANTHER FLIPPASE KINASE 1-RELATED 22 425 - -
Spst11g01222 444 SUPERFAMILY Protein kinase-like (PK-like) 55 431 IPR011009 -
Spst11g01222 444 MobiDBLite consensus disorder prediction 19 41 - -
Spst11g01222 444 FunFam serine/threonine-protein kinase D6PK-like 161 228 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst11g01222 Spst-Chr11 36594354 36597431 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst11g01222 4 444 AGC Kinase Gene Family AT3G44610 62.473 0.0 520
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_RSK-2 Spst11g01222 Pkinase 6.7e-33 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst11g01222 K08286 - gmx:100811470 707.212