Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst11g01216 ATGTCTGCTACCTGTGGTTTCTTCTTCTTCTCCTTCACCCTTTTGTTTTCTTTCTTCTCCTTCCTCATCTTCGTCACCAGGATGAAGCCCTGGTGTAATTGTGATATCTGCAAGAGTTACTTGACCGTCGCCTGGGCCACCAAGTTCGCCAACCTCTGCGACTGGTACGCCCATCTTCTCCGAAAATCACCATCGGGCACCATCCACGTCCATGTCTTGGGGAACACCATAACTTCCAACCCCGACAACGTTGAGTACATTCTCAAGACAAATTTCCAAAACTACCCCAAAGGGAAACCCTTCTCCGCCATCCTCGGCGACCTTCTGGGCCAAGGGATTTTCAACGTCGACGGCGATTCCTGGCGGTTTCAACGCAAAATGGCGAGTCTTGAACTCGGAAGCGTCGCGATTCGCTCCTACGCGATGGACTTGGTCAACGAGGAGATCCACGCGCGGTTAATCCCTCTTGCAGCCTCAACCGCGCGTGGCGAATTCAACGCAAACCGCGTCTTGGATTTACAAGACATACTAAGAAGATTCTCGTTCGACAACATCTGCAAATTCTCGTTCGGTCTCGACCCGGGTTGTCTCCTTCCCACTCTTCCCGTTTCGGACATCGCCGTCGCGTTTGACCTTGCCTCCAAACTCTCAGCGGAACGCGCCATGGCCTCGTCGCCGTTCATTTGGAAAGCGAAGCGACTTTTTCGCACCGGTTCGGAGAAAAAGCTGAAAGAAGCGATCAAGGTCGTCCACGACGTCGCAGACAATATGATAAAGCAACGGAGGGAAATGGGGTTCAACTCGCACCGCGACCTTCTTTCGCGGTTCATGGGATGCGTGGACGACGACGCTTACTTAAGAGATATCGTGGTGAGTTTTCTTTTGGCGGGTCGCGACACGATCGCGTCCGGGTTAACGGGCTTTTTTTGGCTGCTGTCGAGAAGCCCGGAAGTTGAGGCGCGTATCCGGGAGGAGGTAGGCCGGGTGGTAGGCCCCGGCCTGGAGTTCCCAACGTTTGAGCAGATTCGCCATATGCATTACCTGAACGCCGCCGTTCACGAGAGCATGAGGCTGTTTCCGCCCATTCAGTTCGATTCGAAGTTCGCCACGGAGGATGACGTGTTGCCAGATGGTACTTTTGTACGGAAGGGGAGTCGGGTCACTTATCACCCTTACGCCATGGGCCGGATGGAGAACATTTGGGGGCCCGATTGTCTCCAATTCAGGCCCGAAAGGTGGTTGCGTGATGGGGTGTTCGTGCCACCGTGTCCTTTTAAGTACCCCGTTTTTCAGGCTGGTCTAAGGGTGTGTTTGGGGAAGGATTTGGCTTTGATGGAGATGAAATCCGTTGTAATCTCGTTGGTTCGGCGGTTTGACATTCGGGTCGTTGAACCGGATCTGGACCTCCGATTCGCGCCCGGTCTAACTGCCAGTGTAAGAGGCGGGTTACCGGTTCGGGTTTCCGAAAGGAAATAA 1476 0.5386 MSATCGFFFFSFTLLFSFFSFLIFVTRMKPWCNCDICKSYLTVAWATKFANLCDWYAHLLRKSPSGTIHVHVLGNTITSNPDNVEYILKTNFQNYPKGKPFSAILGDLLGQGIFNVDGDSWRFQRKMASLELGSVAIRSYAMDLVNEEIHARLIPLAASTARGEFNANRVLDLQDILRRFSFDNICKFSFGLDPGCLLPTLPVSDIAVAFDLASKLSAERAMASSPFIWKAKRLFRTGSEKKLKEAIKVVHDVADNMIKQRREMGFNSHRDLLSRFMGCVDDDAYLRDIVVSFLLAGRDTIASGLTGFFWLLSRSPEVEARIREEVGRVVGPGLEFPTFEQIRHMHYLNAAVHESMRLFPPIQFDSKFATEDDVLPDGTFVRKGSRVTYHPYAMGRMENIWGPDCLQFRPERWLRDGVFVPPCPFKYPVFQAGLRVCLGKDLALMEMKSVVISLVRRFDIRVVEPDLDLRFAPGLTASVRGGLPVRVSERK 491
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst11g01216 491 PRINTS P450 superfamily signature 428 437 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst11g01216 491 PRINTS P450 superfamily signature 437 448 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst11g01216 491 PRINTS P450 superfamily signature 296 313 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst11g01216 491 PRINTS P450 superfamily signature 350 361 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst11g01216 491 Pfam Cytochrome P450 76 464 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst11g01216 491 PRINTS E-class P450 group I signature 427 437 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst11g01216 491 PRINTS E-class P450 group I signature 305 331 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst11g01216 491 PRINTS E-class P450 group I signature 349 367 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst11g01216 491 PRINTS E-class P450 group I signature 437 460 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst11g01216 491 PRINTS E-class P450 group I signature 285 302 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst11g01216 491 SUPERFAMILY Cytochrome P450 50 490 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst11g01216 491 Gene3D Cytochrome P450 43 491 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst11g01216 491 PANTHER CYTOCHROME P450 23 484 - -
Spst11g01216 491 CDD CYP86A 70 483 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst11g01216 Spst-Chr11 36511152 36512627 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst11g01216 22 490 Cytochrome P450 AT2G27690 62.185 0.0 613
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst11g01216 K20624 - gmx:100813091 850.892
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst1g02747 1 35930763 35932334 Spst11g01216 11 36511152 36512627 ECH
Spst11g01216 11 36511152 36512627 Spst11g01216 11 36511152 36512627 ECH