Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst11g01208 ATGTATAGCAATTTCAAAGAACAAGCAATAGAGTACGTGAAGCAAGCGGTGGATGAAGACAATAAAGGTAATTACGCGAAAGCGTTCCAACTATACATGAACGCGTTGGAGTACTTCAAAACGCACCTCAAGTATGAGAAGAACCCTAAGATCAAGGAGGCCATCACGCAGAAATTCACGGAGTACCTGCGCCGGGCCGAGGAGATCCGGGCCGTCCTTGACGATGGGCCCAGCGGCCCACCTTCCTCCGGGGATGCTGCTGTCGCTACCAGGCCCAAGACCAAGCCCAAAGACGGCGCTGGCGGCGACGGGGAGGATCCTGAACAGGCCAAGCTCCGGGCCGGGCTCAACTCCGCGATCGTTAGGGAAAAGCCCAACGTCAAGTGGAACGACGTGGCCGGACTGGAGAGCGCGAAACAGGCTCTGCAGGAGGCGGTTATCTTGCCGGTGAAGTTTCCTCAGTTTTTCACCGGTAAACGACGACCTTGGAGAGCGTTTTTGTTGTACGGACCACCGGGGACGGGGAAATCGTATTTGGCCAAGGCTGTTGCGACAGAAGCTGATTCTACGTTCTTCAGTGTTTCTTCGTCAGACCTGGTTTCAAAATGGATGGGTGAAAGTGAAAAGCTGGTTTCAAATCTTTTCGAAATGGCTCGTGAAAGTGCACCTTCTATCATATTCATTGATGAAATAGATTCTCTGTGTGGTCAGCGTGGAGAGGGTAATGAGAGTGAAGCTTCAAGACGAATTAAAACTGAACTTCTGGTGCAGATGCAGGGTGTAGGACATAATGATCAGAAAGTTCTTGTTCTAGCAGCCACAAATACGCCTTATGCTCTAGACCAGGCAATAAGGCGACGTTTTGATAAGCGTATATACATACCCCTACCAGATTTGAAGGCTCGCCAACACATGTTCAAGGTGCACCTAGGAGATACTCCCCATAATTTGACTGAAAGTGATTTTGAACATTTGGCACGCAGGACAGAGGGGTTTTCCGGTTCAGATGTATCTGTCTGTGTGAAAGATGTTTTATTTGAACCTGTTCGCAAAACCCAAGATGCCATGTTTTTCATTAAGAATCCTGAGGGGATGTGGATTCCATGTGGGCCAAAGCAACAGAGTGCAATACAAATTACAATGCAGGAGCTTGCTGCGAAAGGACTTGCTTCTAAGATCCTGCCACCACCTATATCGAGGACAGATTTTGACAAAGTACTTGCTAGACAAAGACCCACTGTAAGCAAGGCCGACCTCAACGTTCATGAGAGATTCACAAAGGAAGCTATTGGATCAAGATTCACAAATTTTAAGATTGTTCAACCAGATCTTTCTTTCTATTCTGGTCCCTTTCAGTGTATCATGGGGTTTACCAAACTTTTAAGCTATTCCACCCTTCTCCTTTTCATTGTGTATACTTTGGTTAATGGATCCACCCCAAAGGTAATGAGCATCTTCACTTTGACTTGCATGCATGATGCTGTCTACCACTATATAGTTTACATGGGAGATCATTCACACCCTAATTCAGAATCCGTAATCAGAGCAAACCATGAGATACTAGCTTCAGTTACTGGAAGCCTCAGTGAAGCAAAGGCAGTAGCCCTCCACCATTACAGTAAAAGTTTTCAAGGCTTCTCAGCTATGATTACACCAGAACAAGCTAGTCAACTTGCAGAACATAAATCAGTAGTGTCCGTTTTCGAGAGCAAAATGAATAAACTCCACACAACACATTCTTGGGATTTTCTTGGATTGGATAATATCTACAAGAGCACTCCTAAAGCACTGGACACCGCATCCGAAGTCATTGTTGGTGTCATTGATTCTGGAATCTGGCCGGAATCGGAAAGCTTCACTGATTATGGACTAGGTCCTGTGCCCAAGAAATTTAAGGGAGAATGTGTTACTGGTGATAAGTTTACACTAGCCAATTGCAACAAAAAAATTATTGGTGCTCGGTTCTATTCAAAAGGGTTTGAAGCAGAAAATGGTCCTCTAGACGGTGTTGTCAACAAGATATTTTTCCGGTCAGCTCGAGATAATGATGGACATGGAACACACACAGCTTCCACAATAGCGGGGTCTACTCTTGCTAATGCCAGCTTATTTGGCATTGCCAAAGGAACAGCTAGAGGTGGTGCCCCAAGTGCCAGACTTTCCATCTATAAGGCCTGTTGGTTTGGGTTGTGTAGCGATGCTGATATTCTTTCAGCAATGGATGATGCTATCCATGATGGCGTTGACATACTGTCTCTGTCCCTTGGTCCTAATCCTCCCCAGCCAATTTACTTCGAAGATGCAGTCAGTTTAGGAGCATTCCATGCATTCCGAAATGGTGTTCTTGTTTCTGCTTCTGCTGGAAACTCAGTTTTTCCACGTACTGCATGCAATGTTGCTCCTTGGATTCTCACTGTTGCTGCTAGCACAATAGACAGGGAATTCAGTTCAAATATCTACCTTGGTAACTCAAAGGTCTTAAAGGGTTCTTCTTTGAATCCAATAAAAATGGAGCACTCGTATGGTTTGATATATGGAAGTTCTGCTGCAGCTACTGGAATTCCAGCAACAAATGCAAGCTTCTGCAAGAACAATACTCTAGATCCTACCTTAATCAACGGTAAAATTGTGATCTGTACAATTGAGAATTTCAGTGATAACAGAGAACAGAAGGCCATCGAAATAAGGCAAGGTGGGGGTGTTGGAATGATACTTATTGATCATAATGCCAAAGACATTGGTTTCCAATTTGTCATCCCAAGCACTCTCATCGGTCAGGATGCTGTAGAAGAGCTTCAAGCATATATAAAGACAGATAAGAATCCCACTGCTAGAATCCACCCAACAATAACTGTAGTTGGTACCAAACCAGCACCAGAAATGGCAGCTTTTTCTTCCATGGGGCCAAATATAATAACACCAGACATTATTAAGCCTGATATCACAGCACCTGGAGTGAATATTTTGGCAGCATGGTCTCCAGTAGCAACTGAAGCTACAGTTGAACAACGACCTGTCAACTATAATATTATTTCAGGAACATCAATGTCTTGCCCACACATTACTGCAGTTGCAGCAATTATAAAATCTCACCACCCATCTTGGGGTCCTGCTGCCATAATGTCTTCAATAATGACAACAGCGACAGTTACGGATAACACACACCACCTCATAAGACGAGATCCAAATGGAACTCAAACCACACCATTTGACTATGGATCTGGACATGTTAACCCGGTTGCATCACTCAATCCTGGATTAATATATGATTTTAATTCCCAAGATGTACTCAATTTTCTGTGCAGCAACGGGGCAAACCCAGCACAACTTAAGAACCTCACTGGGGATCTTACTCAATGTCAGAAGCCTCTTACAGCTTCCTACAACTTCAATTATCCTTCAATTGGTGTGTCCAATTTGAATGGAAGTTTATCAGTTTATCGTACAGTTACTTACTACGGTGAAGAGCCAACAGTATATTCTGCAAGTGTTGAAAATCCATCTGGTGTGAAGGTTACAGTTACTCCAGCAGAATTGAAGTTCGGGAAAACTAGGGAGAAGATAACTTTCAGGATTGATGTCTTCCCTTTCAAGAAAAGCAATGGAAACTTTGTGTTTGGTGCCTTGATATGGAATAATGGCAAACAAAGGGTTAGGAGTCCTATTGGTCTCAATGTACTCTCTACTTAA 3690 0.439 MYSNFKEQAIEYVKQAVDEDNKGNYAKAFQLYMNALEYFKTHLKYEKNPKIKEAITQKFTEYLRRAEEIRAVLDDGPSGPPSSGDAAVATRPKTKPKDGAGGDGEDPEQAKLRAGLNSAIVREKPNVKWNDVAGLESAKQALQEAVILPVKFPQFFTGKRRPWRAFLLYGPPGTGKSYLAKAVATEADSTFFSVSSSDLVSKWMGESEKLVSNLFEMARESAPSIIFIDEIDSLCGQRGEGNESEASRRIKTELLVQMQGVGHNDQKVLVLAATNTPYALDQAIRRRFDKRIYIPLPDLKARQHMFKVHLGDTPHNLTESDFEHLARRTEGFSGSDVSVCVKDVLFEPVRKTQDAMFFIKNPEGMWIPCGPKQQSAIQITMQELAAKGLASKILPPPISRTDFDKVLARQRPTVSKADLNVHERFTKEAIGSRFTNFKIVQPDLSFYSGPFQCIMGFTKLLSYSTLLLFIVYTLVNGSTPKVMSIFTLTCMHDAVYHYIVYMGDHSHPNSESVIRANHEILASVTGSLSEAKAVALHHYSKSFQGFSAMITPEQASQLAEHKSVVSVFESKMNKLHTTHSWDFLGLDNIYKSTPKALDTASEVIVGVIDSGIWPESESFTDYGLGPVPKKFKGECVTGDKFTLANCNKKIIGARFYSKGFEAENGPLDGVVNKIFFRSARDNDGHGTHTASTIAGSTLANASLFGIAKGTARGGAPSARLSIYKACWFGLCSDADILSAMDDAIHDGVDILSLSLGPNPPQPIYFEDAVSLGAFHAFRNGVLVSASAGNSVFPRTACNVAPWILTVAASTIDREFSSNIYLGNSKVLKGSSLNPIKMEHSYGLIYGSSAAATGIPATNASFCKNNTLDPTLINGKIVICTIENFSDNREQKAIEIRQGGGVGMILIDHNAKDIGFQFVIPSTLIGQDAVEELQAYIKTDKNPTARIHPTITVVGTKPAPEMAAFSSMGPNIITPDIIKPDITAPGVNILAAWSPVATEATVEQRPVNYNIISGTSMSCPHITAVAAIIKSHHPSWGPAAIMSSIMTTATVTDNTHHLIRRDPNGTQTTPFDYGSGHVNPVASLNPGLIYDFNSQDVLNFLCSNGANPAQLKNLTGDLTQCQKPLTASYNFNYPSIGVSNLNGSLSVYRTVTYYGEEPTVYSASVENPSGVKVTVTPAELKFGKTREKITFRIDVFPFKKSNGNFVFGALIWNNGKQRVRSPIGLNVLST 1229
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst11g01208 1229 ProSitePatterns Serine proteases, subtilase family, serine active site. 1013 1023 IPR023828 -
Spst11g01208 1229 SUPERFAMILY Subtilisin-like 575 1087 IPR036852 GO:0004252|GO:0006508
Spst11g01208 1229 Pfam PA domain 859 932 IPR003137 -
Spst11g01208 1229 Pfam ATPase family associated with various cellular activities (AAA) 167 296 IPR003959 GO:0005524|GO:0016887
Spst11g01208 1229 FunFam vacuolar protein sorting-associated protein 4A 298 413 - -
Spst11g01208 1229 Gene3D Peptidase S8/S53 domain 603 1095 IPR036852 GO:0004252|GO:0006508
Spst11g01208 1229 Pfam Peptidase inhibitor I9 497 575 IPR010259 -
Spst11g01208 1229 CDD RecA-like_VPS4 124 294 - -
Spst11g01208 1229 Gene3D - 812 953 - -
Spst11g01208 1229 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 487 576 IPR037045 -
Spst11g01208 1229 ProSitePatterns AAA-protein family signature. 268 287 IPR003960 GO:0005524|GO:0016887
Spst11g01208 1229 Gene3D - 125 421 IPR027417 -
Spst11g01208 1229 FunFam Vacuolar protein sorting-associated protein 4 125 305 - -
Spst11g01208 1229 ProSiteProfiles Serine proteases, subtilase domain profile. 580 1083 - -
Spst11g01208 1229 Pfam MIT (microtubule interacting and transport) domain 7 70 IPR007330 -
Spst11g01208 1229 Pfam Fibronectin type-III domain 1129 1222 IPR041469 -
Spst11g01208 1229 FunFam Suppressor of K+ transport growth defect 1 6 75 - -
Spst11g01208 1229 Pfam Subtilase family 601 1055 IPR000209 GO:0006508|GO:0008236
Spst11g01208 1229 CDD Peptidases_S8_3 574 1049 IPR034197 -
Spst11g01208 1229 CDD MIT_VPS4 4 76 IPR045253 -
Spst11g01208 1229 Gene3D - 6 75 - -
Spst11g01208 1229 SMART AAA_5 162 298 IPR003593 GO:0016887
Spst11g01208 1229 PRINTS Subtilisin serine protease family (S8) signature 1012 1028 IPR015500 -
Spst11g01208 1229 PRINTS Subtilisin serine protease family (S8) signature 600 619 IPR015500 -
Spst11g01208 1229 PRINTS Subtilisin serine protease family (S8) signature 681 694 IPR015500 -
Spst11g01208 1229 CDD PA_subtilisin_like 818 946 - -
Spst11g01208 1229 Gene3D - 298 413 - -
Spst11g01208 1229 FunFam Subtilisin-like protease SBT1.5 602 833 - -
Spst11g01208 1229 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 125 426 IPR027417 -
Spst11g01208 1229 SMART smart 2 79 IPR007330 -
Spst11g01208 1229 Pfam Vps4 C terminal oligomerisation domain 366 428 IPR015415 -
Spst11g01208 1229 Gene3D - 1100 1226 - -
Spst11g01208 1229 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 498 1222 IPR045051 -
Spst11g01208 1229 MobiDBLite consensus disorder prediction 71 109 - -
Spst11g01208 1229 SUPERFAMILY MIT domain 2 83 IPR036181 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst11g01208 Spst-Chr11 36383431 36393311 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst11g01208 498 1222 Subtilisin-like Serine Gene Family AT2G04160 43.709 0.0 578
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst11g01208 - - gmx:100792672 1361.28